Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS04305 and RR42_RS04310 are separated by 13 nucleotides RR42_RS04310 and RR42_RS04315 are separated by 133 nucleotides RR42_RS04315 and RR42_RS04320 are separated by 170 nucleotides
RR42_RS04305: RR42_RS04305 - membrane protein, at 956,477 to 957,118
_RS04305
RR42_RS04310: RR42_RS04310 - DNA mismatch repair protein MutS, at 957,132 to 957,836
_RS04310
RR42_RS04315: RR42_RS04315 - thioredoxin reductase, at 957,970 to 958,917
_RS04315
RR42_RS04320: RR42_RS04320 - cell division protein FtsK, at 959,088 to 961,412
_RS04320
Position (kb) 957
958
959 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 957.056 kb on + strand at 957.056 kb on + strand at 957.056 kb on + strand at 957.057 kb on - strand at 957.057 kb on - strand at 957.210 kb on + strand, within RR42_RS04310 at 957.210 kb on + strand, within RR42_RS04310 at 957.211 kb on - strand, within RR42_RS04310 at 957.645 kb on + strand, within RR42_RS04310 at 957.646 kb on - strand, within RR42_RS04310 at 957.865 kb on + strand at 957.866 kb on - strand at 957.866 kb on - strand at 957.867 kb on + strand at 957.867 kb on + strand at 957.868 kb on - strand at 957.868 kb on - strand at 957.971 kb on + strand at 957.972 kb on - strand at 957.972 kb on - strand at 958.978 kb on + strand at 958.978 kb on + strand at 958.978 kb on + strand at 958.979 kb on - strand at 958.979 kb on - strand at 958.979 kb on - strand at 958.979 kb on - strand at 958.979 kb on - strand at 958.979 kb on - strand at 959.041 kb on + strand at 959.042 kb on - strand at 959.042 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 957,056 + +0.8 957,056 + -0.6 957,056 + -0.3 957,057 - -0.0 957,057 - +0.9 957,210 + RR42_RS04310 0.11 +0.1 957,210 + RR42_RS04310 0.11 -0.5 957,211 - RR42_RS04310 0.11 -0.6 957,645 + RR42_RS04310 0.73 +0.9 957,646 - RR42_RS04310 0.73 -0.5 957,865 + -0.1 957,866 - -0.4 957,866 - +0.5 957,867 + +0.3 957,867 + -0.9 957,868 - -0.7 957,868 - +0.5 957,971 + +0.4 957,972 - +0.0 957,972 - -0.2 958,978 + -0.3 958,978 + -2.9 958,978 + -0.6 958,979 - +0.2 958,979 - +0.0 958,979 - -0.0 958,979 - -0.3 958,979 - -0.4 958,979 - -0.2 959,041 + -0.4 959,042 - +1.0 959,042 - -0.7
Or see this region's nucleotide sequence