Experiment: Glycine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02835 and RR42_RS02840 overlap by 4 nucleotides RR42_RS02840 and RR42_RS02845 are separated by 703 nucleotides
RR42_RS02835: RR42_RS02835 - acyltransferase, at 631,208 to 632,815
_RS02835
RR42_RS02840: RR42_RS02840 - cation transporter, at 632,812 to 633,684
_RS02840
RR42_RS02845: RR42_RS02845 - 16S rRNA maturation RNase YbeY, at 634,388 to 635,143
_RS02845
Position (kb) 632
633
634 Strain fitness (log2 ratio) -1
0
1
2 at 632.816 kb on - strand at 633.183 kb on - strand, within RR42_RS02840 at 633.241 kb on - strand, within RR42_RS02840 at 633.315 kb on - strand, within RR42_RS02840 at 633.315 kb on - strand, within RR42_RS02840 at 633.318 kb on - strand, within RR42_RS02840 at 633.375 kb on - strand, within RR42_RS02840 at 633.500 kb on - strand, within RR42_RS02840 at 633.726 kb on + strand at 633.726 kb on + strand at 633.726 kb on + strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.727 kb on - strand at 633.799 kb on + strand at 633.799 kb on + strand at 633.800 kb on - strand at 633.800 kb on - strand at 633.826 kb on - strand at 633.874 kb on - strand at 633.918 kb on - strand at 634.342 kb on + strand at 634.342 kb on + strand at 634.343 kb on - strand at 634.353 kb on - strand at 634.383 kb on + strand at 634.383 kb on + strand at 634.383 kb on + strand at 634.383 kb on + strand at 634.384 kb on - strand at 634.384 kb on - strand at 634.389 kb on + strand at 634.389 kb on + strand at 634.390 kb on - strand at 634.390 kb on - strand at 634.422 kb on + strand at 634.423 kb on - strand at 634.423 kb on - strand at 634.423 kb on - strand at 634.423 kb on - strand at 634.423 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Glycine (N) remove 632,816 - +0.3 633,183 - RR42_RS02840 0.42 +0.6 633,241 - RR42_RS02840 0.49 +0.5 633,315 - RR42_RS02840 0.58 -0.3 633,315 - RR42_RS02840 0.58 +0.7 633,318 - RR42_RS02840 0.58 +1.1 633,375 - RR42_RS02840 0.64 +0.9 633,500 - RR42_RS02840 0.79 +1.7 633,726 + -0.3 633,726 + -0.3 633,726 + +2.1 633,727 - +0.3 633,727 - +0.2 633,727 - -1.6 633,727 - +0.1 633,727 - -0.0 633,799 + +0.3 633,799 + +0.1 633,800 - +0.5 633,800 - +0.0 633,826 - -0.5 633,874 - +1.0 633,918 - +0.9 634,342 + +0.1 634,342 + +0.3 634,343 - +0.4 634,353 - -0.5 634,383 + -0.7 634,383 + -0.2 634,383 + +0.1 634,383 + +0.5 634,384 - +0.9 634,384 - +0.9 634,389 + -0.2 634,389 + -0.3 634,390 - -0.9 634,390 - -0.7 634,422 + +1.0 634,423 - -1.2 634,423 - -1.6 634,423 - -1.1 634,423 - -0.1 634,423 - -0.0
Or see this region's nucleotide sequence