Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05825

Experiment: rhizosphere sample 5; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 5; outgrowth in LB
1,240,767	+		ABZR87_RS05820	0.54	-0.0
1,240,767	+		ABZR87_RS05820	0.54	-0.4
1,240,767	+		ABZR87_RS05820	0.54	-0.3
1,240,767	+		ABZR87_RS05820	0.54	-0.4
1,240,767	+		ABZR87_RS05820	0.54	+0.4
1,240,768	-		ABZR87_RS05820	0.54	+0.8
1,240,768	-		ABZR87_RS05820	0.54	-0.2
1,240,768	-		ABZR87_RS05820	0.54	+0.3
1,240,805	-		ABZR87_RS05820	0.57	-0.1
1,240,823	-		ABZR87_RS05820	0.59	+0.3
1,240,844	+		ABZR87_RS05820	0.60	+1.4
1,241,155	+		ABZR87_RS05820	0.84	-0.5
1,241,156	-		ABZR87_RS05820	0.84	-0.1
1,241,156	-		ABZR87_RS05820	0.84	-0.1
1,241,318	+				+0.2
1,241,318	+				-1.2
1,241,318	+				+0.5
1,241,411	-				+0.8
1,241,416	+				-0.2
1,241,589	+				+0.8
1,241,589	+				+0.0
1,241,589	+				-2.1
1,241,589	+				+0.5
1,241,590	-				-1.1
1,241,590	-				+0.7
1,241,590	-				+0.0
1,241,590	-				-0.5
1,241,590	-				-0.0
1,241,590	-				+1.0
1,241,630	+				+0.1
1,241,630	+				-0.6
1,241,630	+				-0.8
1,241,630	+				+0.1
1,241,630	+				+0.6
1,241,630	+				-0.4
1,241,630	+				-0.4
1,241,630	+				+0.2
1,241,631	-				-0.5
1,241,631	-				-0.0
1,241,631	-				+0.3
1,241,631	-				-0.3
1,241,633	+				-0.6
1,241,660	+		ABZR87_RS05825	0.11	-0.0
1,241,661	-		ABZR87_RS05825	0.11	-0.7
1,241,727	+		ABZR87_RS05825	0.17	+1.1
1,241,778	-		ABZR87_RS05825	0.22	-1.1
1,241,793	+		ABZR87_RS05825	0.23	-0.4
1,241,793	+		ABZR87_RS05825	0.23	+0.7
1,241,794	-		ABZR87_RS05825	0.23	-0.1
1,241,972	+		ABZR87_RS05825	0.40	-0.4
1,241,972	+		ABZR87_RS05825	0.40	-2.6
1,241,972	+		ABZR87_RS05825	0.40	-0.7
1,241,973	-		ABZR87_RS05825	0.40	-1.6
1,241,973	-		ABZR87_RS05825	0.40	-1.0
1,241,986	+		ABZR87_RS05825	0.41	-1.5
1,241,986	+		ABZR87_RS05825	0.41	-0.0
1,241,986	+		ABZR87_RS05825	0.41	-1.1
1,241,986	+		ABZR87_RS05825	0.41	-0.3
1,241,986	+		ABZR87_RS05825	0.41	-0.7
1,241,986	+		ABZR87_RS05825	0.41	-0.4
1,241,986	+		ABZR87_RS05825	0.41	-0.9
1,241,987	-		ABZR87_RS05825	0.42	-0.9
1,241,987	-		ABZR87_RS05825	0.42	-0.9
1,242,417	+		ABZR87_RS05825	0.82	-0.0
1,242,418	-		ABZR87_RS05825	0.82	+0.2
1,242,505	+				+0.9
1,242,505	+				-0.3
1,242,505	+				+0.9
1,242,505	+				+0.1
1,242,505	+				-1.5
1,242,506	-				+1.7
1,242,506	-				+0.1
1,242,585	+				-0.9
1,242,639	+				-0.1
1,242,703	-				-0.9
1,242,703	-				+0.1
1,242,802	+				+0.7
1,242,802	+				+0.3
1,242,802	+				+0.0
1,242,802	+				-1.5
1,242,802	+				+0.1
1,242,803	-				+0.9
1,242,803	-				+0.3
1,242,803	-				+0.4
1,242,899	+		ABZR87_RS05830	0.11	+0.2
1,242,899	+		ABZR87_RS05830	0.11	+2.1
1,242,899	+		ABZR87_RS05830	0.11	-0.1
1,242,899	+		ABZR87_RS05830	0.11	+0.6
1,242,899	+		ABZR87_RS05830	0.11	+2.0
1,242,899	+		ABZR87_RS05830	0.11	+0.1
1,242,899	+		ABZR87_RS05830	0.11	-0.6
1,242,899	+		ABZR87_RS05830	0.11	+1.0
1,242,900	-		ABZR87_RS05830	0.11	+0.1
1,242,900	-		ABZR87_RS05830	0.11	+0.3
1,242,900	-		ABZR87_RS05830	0.11	-1.2
1,242,900	-		ABZR87_RS05830	0.11	-0.1
1,242,900	-		ABZR87_RS05830	0.11	+0.5
1,242,926	+		ABZR87_RS05830	0.13	-1.2
1,242,926	+		ABZR87_RS05830	0.13	+0.4
1,242,926	+		ABZR87_RS05830	0.13	+0.1
1,242,926	+		ABZR87_RS05830	0.13	-0.1
1,242,926	+		ABZR87_RS05830	0.13	+0.4
1,242,926	+		ABZR87_RS05830	0.13	-0.8
1,242,926	+		ABZR87_RS05830	0.13	+0.5
1,242,927	-		ABZR87_RS05830	0.14	-0.2
1,242,927	-		ABZR87_RS05830	0.14	-0.4
1,242,927	-		ABZR87_RS05830	0.14	+2.9
1,242,927	-		ABZR87_RS05830	0.14	-0.8
1,242,927	-		ABZR87_RS05830	0.14	-0.7
1,243,001	+		ABZR87_RS05830	0.20	-0.2
1,243,001	+		ABZR87_RS05830	0.20	-0.5
1,243,002	-		ABZR87_RS05830	0.20	-0.5
1,243,002	-		ABZR87_RS05830	0.20	-0.5
1,243,002	-		ABZR87_RS05830	0.20	-0.7
1,243,002	-		ABZR87_RS05830	0.20	-0.0
1,243,002	-		ABZR87_RS05830	0.20	+0.8
1,243,038	-		ABZR87_RS05830	0.23	+1.5
1,243,038	-		ABZR87_RS05830	0.23	-0.1
1,243,196	+		ABZR87_RS05830	0.37	+0.6
1,243,196	+		ABZR87_RS05830	0.37	+2.9
1,243,196	+		ABZR87_RS05830	0.37	+0.6
1,243,196	+		ABZR87_RS05830	0.37	-1.5
1,243,197	-		ABZR87_RS05830	0.38	-0.9
1,243,197	-		ABZR87_RS05830	0.38	-0.4
1,243,199	+		ABZR87_RS05830	0.38	-0.6
1,243,200	-		ABZR87_RS05830	0.38	+1.0
1,243,200	-		ABZR87_RS05830	0.38	+0.1
1,243,200	-		ABZR87_RS05830	0.38	+0.9
1,243,228	-		ABZR87_RS05830	0.40	-0.2
1,243,228	-		ABZR87_RS05830	0.40	+0.8
1,243,229	+		ABZR87_RS05830	0.40	-0.2
1,243,229	+		ABZR87_RS05830	0.40	+0.3
1,243,230	-		ABZR87_RS05830	0.40	-0.6
1,243,322	+		ABZR87_RS05830	0.49	-0.5
1,243,322	+		ABZR87_RS05830	0.49	-0.2
1,243,322	+		ABZR87_RS05830	0.49	+0.9
1,243,323	-		ABZR87_RS05830	0.49	+0.4
1,243,323	-		ABZR87_RS05830	0.49	+0.2
1,243,385	+		ABZR87_RS05830	0.54	+0.6
1,243,385	+		ABZR87_RS05830	0.54	+0.6
1,243,385	+		ABZR87_RS05830	0.54	+0.8
1,243,386	-		ABZR87_RS05830	0.54	-0.6
1,243,386	-		ABZR87_RS05830	0.54	+0.1
1,243,424	+		ABZR87_RS05830	0.58	-1.0
1,243,424	+		ABZR87_RS05830	0.58	+0.4
1,243,424	+		ABZR87_RS05830	0.58	+1.9
1,243,443	-		ABZR87_RS05830	0.59	+2.2
1,243,473	+		ABZR87_RS05830	0.62	+0.6
1,243,473	+		ABZR87_RS05830	0.62	+0.6
1,243,473	+		ABZR87_RS05830	0.62	+0.6
1,243,473	+		ABZR87_RS05830	0.62	+0.4
1,243,473	+		ABZR87_RS05830	0.62	-0.3
1,243,473	+		ABZR87_RS05830	0.62	+0.3
1,243,473	+		ABZR87_RS05830	0.62	+1.1
1,243,474	-		ABZR87_RS05830	0.62	-0.4
1,243,474	-		ABZR87_RS05830	0.62	+0.1
1,243,474	-		ABZR87_RS05830	0.62	+0.3
1,243,474	-		ABZR87_RS05830	0.62	+0.2
1,243,484	+		ABZR87_RS05830	0.63	-0.3
1,243,484	+		ABZR87_RS05830	0.63	-0.8
1,243,485	-		ABZR87_RS05830	0.63	-0.4
1,243,485	-		ABZR87_RS05830	0.63	-0.7
1,243,526	+		ABZR87_RS05830	0.67	+0.9
1,243,527	-		ABZR87_RS05830	0.67	+0.7