Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT3422

Experiment: Hyaluronic from Streptococcus equi (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Hyaluronic from Streptococcus equi (C)
4,407,915	+		BT3421	0.23	-1.0
4,407,922	+		BT3421	0.24	-0.4
4,407,969	+		BT3421	0.27	+0.0
4,407,979	-		BT3421	0.28	-1.7
4,407,983	-		BT3421	0.29	-1.9
4,407,983	-		BT3421	0.29	-1.5
4,407,984	+		BT3421	0.29	-1.7
4,408,035	+		BT3421	0.33	+0.6
4,408,035	+		BT3421	0.33	-0.7
4,408,036	-		BT3421	0.33	-1.0
4,408,072	+		BT3421	0.35	+0.4
4,408,083	+		BT3421	0.36	-1.0
4,408,084	-		BT3421	0.36	-0.1
4,408,149	+		BT3421	0.41	-0.9
4,408,199	+		BT3421	0.45	+0.6
4,408,214	+		BT3421	0.46	-1.2
4,408,239	-		BT3421	0.48	-1.1
4,408,242	+		BT3421	0.49	-0.0
4,408,243	-		BT3421	0.49	+0.6
4,408,258	+		BT3421	0.50	-1.0
4,408,287	-		BT3421	0.52	-0.7
4,408,290	-		BT3421	0.52	-1.0
4,408,294	+		BT3421	0.53	+0.3
4,408,318	-		BT3421	0.55	+0.6
4,408,368	-		BT3421	0.58	-1.2
4,408,375	-		BT3421	0.59	-0.7
4,408,484	-		BT3421	0.67	-2.1
4,408,494	+		BT3421	0.68	-0.5
4,408,520	-		BT3421	0.70	-1.9
4,408,521	-		BT3421	0.70	+0.6
4,408,679	+		BT3421	0.83	+1.6
4,408,711	-		BT3421	0.85	-1.2
4,408,716	-		BT3421	0.85	-1.2
4,408,725	-		BT3421	0.86	+0.9
4,408,742	-		BT3421	0.87	-0.8
4,408,785	+				-0.6
4,408,907	+				+0.0
4,408,918	+				-0.4
4,408,921	-				+0.0
4,408,949	+				+1.6
4,408,998	+				+0.3
4,408,999	-				+0.9
4,409,026	-				-1.2
4,409,026	-				-1.7
4,409,026	-				-0.6
4,409,028	+				-1.5
4,409,029	-				-0.5
4,409,032	+				+0.1
4,409,152	+				-0.4
4,409,157	-				+1.0
4,409,157	-				+2.6
4,409,157	-				-1.5
4,409,157	-				-1.0
4,409,158	+				-1.0
4,409,159	-				-0.1
4,409,159	-				+0.0
4,409,193	-		BT3422	0.10	-2.1
4,409,239	+		BT3422	0.12	-0.3
4,409,239	+		BT3422	0.12	+0.6
4,409,240	-		BT3422	0.12	+0.0
4,409,248	-		BT3422	0.12	-0.1
4,409,285	+		BT3422	0.14	-0.6
4,409,286	-		BT3422	0.14	+1.0
4,409,290	+		BT3422	0.14	-2.3
4,409,290	+		BT3422	0.14	+1.6
4,409,291	-		BT3422	0.14	-0.7
4,409,291	-		BT3422	0.14	-0.4
4,409,291	-		BT3422	0.14	-2.0
4,409,300	-		BT3422	0.14	-1.7
4,409,301	+		BT3422	0.14	+0.0
4,409,460	-		BT3422	0.20	-0.3
4,409,486	+		BT3422	0.21	+0.3
4,409,487	+		BT3422	0.21	-0.6
4,409,488	-		BT3422	0.21	-1.2
4,409,519	-		BT3422	0.22	-1.1
4,409,534	+		BT3422	0.23	-0.6
4,409,535	-		BT3422	0.23	-0.5
4,409,577	+		BT3422	0.24	+0.5
4,409,578	-		BT3422	0.24	-2.4
4,409,633	+		BT3422	0.26	-0.6
4,409,669	-		BT3422	0.28	-1.2
4,409,716	+		BT3422	0.29	+0.6
4,409,717	-		BT3422	0.30	-0.1
4,409,718	+		BT3422	0.30	-1.2
4,409,719	-		BT3422	0.30	+1.3
4,409,739	+		BT3422	0.30	-1.2
4,409,740	-		BT3422	0.30	-0.6
4,409,742	+		BT3422	0.30	-1.2
4,409,743	-		BT3422	0.30	-1.0
4,409,748	-		BT3422	0.31	-1.2
4,409,755	-		BT3422	0.31	-1.6
4,409,766	-		BT3422	0.31	-1.4
4,409,786	+		BT3422	0.32	-0.3
4,409,825	+		BT3422	0.33	-1.1
4,409,826	-		BT3422	0.34	-1.4
4,409,962	-		BT3422	0.39	-0.0
4,409,969	+		BT3422	0.39	-0.4
4,410,012	-		BT3422	0.40	-0.7
4,410,078	-		BT3422	0.43	-0.4
4,410,219	+		BT3422	0.48	-1.4
4,410,220	-		BT3422	0.48	-0.7
4,410,220	-		BT3422	0.48	-0.1
4,410,223	+		BT3422	0.48	+0.3
4,410,349	-		BT3422	0.53	-0.4
4,410,349	-		BT3422	0.53	+1.1
4,410,349	-		BT3422	0.53	-1.0
4,410,460	-		BT3422	0.57	-1.7
4,410,460	-		BT3422	0.57	-2.3
4,410,460	-		BT3422	0.57	-0.6
4,410,465	-		BT3422	0.57	+1.6
4,410,500	+		BT3422	0.58	+0.2
4,410,508	-		BT3422	0.59	-0.0
4,410,575	+		BT3422	0.61	+0.6
4,410,576	-		BT3422	0.61	-0.9
4,410,633	+		BT3422	0.63	-0.7
4,410,696	+		BT3422	0.66	-2.8
4,410,696	+		BT3422	0.66	+0.4
4,410,757	-		BT3422	0.68	+0.7
4,410,790	+		BT3422	0.69	-0.4
4,410,791	-		BT3422	0.69	-0.4
4,410,859	-				+2.6
4,410,861	-		BT3422	0.72	-0.5
4,410,863	+		BT3422	0.72	+0.1
4,410,864	-		BT3422	0.72	-0.4
4,410,865	+		BT3422	0.72	+0.6
4,410,882	+		BT3422	0.72	-1.0
4,410,883	-		BT3422	0.72	-1.6
4,410,923	+		BT3422	0.74	+0.6
4,410,924	-		BT3422	0.74	-0.8
4,410,928	-		BT3422	0.74	-1.0
4,410,960	+		BT3422	0.75	-1.0
4,410,992	-		BT3422	0.76	-2.0
4,410,992	-		BT3422	0.76	-0.4
4,411,050	+		BT3422	0.79	+0.9
4,411,051	-		BT3422	0.79	+0.0
4,411,072	-		BT3422	0.79	+0.1
4,411,088	-		BT3422	0.80	+1.6
4,411,191	-		BT3422	0.84	-0.8
4,411,193	-		BT3422	0.84	-1.6
4,411,198	-		BT3422	0.84	+1.2
4,411,232	-		BT3422	0.85	+0.1
4,411,232	-		BT3422	0.85	-0.7
4,411,232	-		BT3422	0.85	+0.4
4,411,255	-		BT3422	0.86	-0.3
4,411,316	-		BT3422	0.88	+0.4
4,411,333	-		BT3422	0.89	-0.8
4,411,339	-		BT3422	0.89	-3.3
4,411,423	-				-2.0
4,411,427	-				-1.7
4,411,474	-				-1.1
4,411,657	+				+0.6
4,411,672	+				-2.5
4,411,691	+				-1.2
4,411,701	-				-0.8
4,411,741	-				-1.1
4,411,747	+				-1.4
4,411,753	-				-1.0
4,411,779	+				+0.0
4,411,837	-				-0.8
4,411,860	+		BT3423	0.13	+1.2
4,411,881	+		BT3423	0.16	-1.3
4,411,886	+		BT3423	0.17	-0.4
4,411,887	-		BT3423	0.17	+1.0
4,411,932	+		BT3423	0.23	-0.7
4,411,991	-		BT3423	0.32	-1.4
4,411,998	+		BT3423	0.33	-1.4
4,412,025	-		BT3423	0.37	+0.6
4,412,083	-		BT3423	0.45	+0.6
4,412,159	-		BT3423	0.56	-1.4
4,412,196	+		BT3423	0.61	-1.7
4,412,196	+		BT3423	0.61	-0.9
4,412,238	+		BT3423	0.67	-1.7
4,412,257	+		BT3423	0.70	-1.2
4,412,257	+		BT3423	0.70	-0.7
4,412,258	-		BT3423	0.70	-1.6
4,412,258	-		BT3423	0.70	-1.1
4,412,260	-		BT3423	0.71	-0.9
4,412,260	-		BT3423	0.71	-1.9
4,412,260	-		BT3423	0.71	-0.9
4,412,260	-		BT3423	0.71	-1.2
4,412,262	-		BT3423	0.71	-0.6
4,412,290	-		BT3423	0.75	-0.9
4,412,290	-		BT3423	0.75	+0.2
4,412,299	-		BT3423	0.76	-0.8
4,412,299	-		BT3423	0.76	-1.2
4,412,308	-		BT3423	0.77	-1.0
4,412,364	+		BT3423	0.86	-1.7
4,412,387	-		BT3423	0.89	-0.6
4,412,394	-				+1.6
4,412,400	+				-0.2
4,412,400	+				-1.4
4,412,433	+				+0.9
4,412,434	-				+0.0
4,412,464	+				+0.6
4,412,464	+				-0.4
4,412,477	-				-1.0
4,412,479	-				+0.6
4,412,501	-				-2.4
4,412,543	+				-1.0
4,412,584	+				-1.5
4,412,590	-				-0.3
4,412,610	-				-0.3