Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT0697

Experiment: Hyaluronic from Streptococcus equi (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntBT0696 and BT0697 are separated by 151 nucleotidesBT0697 and BT0698 are separated by 182 nucleotides BT0696: BT0696 - putative membrane protein (NCBI ptt file), at 866,986 to 868,356 BT0696 BT0697: BT0697 - putative phosphatase/phosphohexomutase (NCBI ptt file), at 868,508 to 869,155 BT0697 BT0698: BT0698 - 3-methyl-2-oxobutanoate hydroxymethyltransferase (NCBI ptt file), at 869,338 to 870,159 BT0698 Position (kb) 868 869 870Strain fitness (log2 ratio) -2 -1 0 1at 867.568 kb on - strand, within BT0696at 867.694 kb on - strand, within BT0696at 867.799 kb on - strand, within BT0696at 867.805 kb on - strand, within BT0696at 867.908 kb on + strand, within BT0696at 867.995 kb on - strand, within BT0696at 867.995 kb on - strand, within BT0696at 868.063 kb on - strand, within BT0696at 868.204 kb on - strand, within BT0696at 868.257 kb on + strandat 868.307 kb on - strandat 868.365 kb on - strandat 868.508 kb on - strandat 868.577 kb on + strand, within BT0697at 868.578 kb on - strand, within BT0697at 868.748 kb on + strand, within BT0697at 868.754 kb on + strand, within BT0697at 868.985 kb on + strand, within BT0697at 869.096 kb on + strandat 869.099 kb on - strandat 869.104 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Hyaluronic from Streptococcus equi (C)
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867,568 - BT0696 0.42 +0.2
867,694 - BT0696 0.52 -2.0
867,799 - BT0696 0.59 +1.7
867,805 - BT0696 0.60 -0.1
867,908 + BT0696 0.67 -1.9
867,995 - BT0696 0.74 -0.3
867,995 - BT0696 0.74 +1.1
868,063 - BT0696 0.79 +0.7
868,204 - BT0696 0.89 +0.0
868,257 + +0.2
868,307 - +0.1
868,365 - -1.5
868,508 - +1.2
868,577 + BT0697 0.11 +0.7
868,578 - BT0697 0.11 -1.6
868,748 + BT0697 0.37 -0.7
868,754 + BT0697 0.38 -1.7
868,985 + BT0697 0.74 -1.3
869,096 + -0.1
869,099 - +0.1
869,104 - +0.7

Or see this region's nucleotide sequence