Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2578

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
2,662,118	+				-1.1
2,662,118	+				+0.3
2,662,118	+				+2.0
2,662,118	+				-2.3
2,662,126	-				-0.4
2,662,126	-				+0.2
2,662,126	-				+2.3
2,662,126	-				+0.8
2,662,126	-				+0.9
2,662,126	-				-0.3
2,662,148	-				+1.4
2,662,181	+				-2.1
2,662,185	-				-3.3
2,662,187	+				-1.7
2,662,192	+				-0.7
2,662,211	+				-2.7
2,662,231	-				-0.9
2,662,250	+				+0.1
2,662,256	-				-1.5
2,662,258	-				-1.7
2,662,258	-				-4.5
2,662,268	-	murQ	Synpcc7942_2577	0.11	-1.4
2,662,268	-	murQ	Synpcc7942_2577	0.11	-1.7
2,662,307	+	murQ	Synpcc7942_2577	0.15	-1.7
2,662,315	-	murQ	Synpcc7942_2577	0.16	-3.7
2,662,315	-	murQ	Synpcc7942_2577	0.16	-0.7
2,662,338	-	murQ	Synpcc7942_2577	0.18	-3.7
2,662,338	-	murQ	Synpcc7942_2577	0.18	-1.7
2,662,370	+	murQ	Synpcc7942_2577	0.22	-1.2
2,662,370	+	murQ	Synpcc7942_2577	0.22	-3.3
2,662,378	-	murQ	Synpcc7942_2577	0.23	-2.7
2,662,415	+	murQ	Synpcc7942_2577	0.27	-0.8
2,662,416	+	murQ	Synpcc7942_2577	0.27	-1.7
2,662,423	-	murQ	Synpcc7942_2577	0.27	-3.3
2,662,423	-	murQ	Synpcc7942_2577	0.27	-2.7
2,662,440	+	murQ	Synpcc7942_2577	0.29	+0.3
2,662,468	+	murQ	Synpcc7942_2577	0.32	-3.7
2,662,498	+	murQ	Synpcc7942_2577	0.36	-1.7
2,662,498	+	murQ	Synpcc7942_2577	0.36	-1.7
2,662,506	-	murQ	Synpcc7942_2577	0.36	-2.7
2,662,637	+	murQ	Synpcc7942_2577	0.51	-1.7
2,662,643	+	murQ	Synpcc7942_2577	0.51	-2.7
2,662,659	+	murQ	Synpcc7942_2577	0.53	-1.7
2,662,731	-	murQ	Synpcc7942_2577	0.61	-0.1
2,662,733	+	murQ	Synpcc7942_2577	0.61	-2.3
2,662,735	+	murQ	Synpcc7942_2577	0.61	-1.7
2,662,787	+	murQ	Synpcc7942_2577	0.67	-1.7
2,662,788	+	murQ	Synpcc7942_2577	0.67	-2.7
2,662,807	-	murQ	Synpcc7942_2577	0.69	-0.7
2,662,848	+	murQ	Synpcc7942_2577	0.73	-1.7
2,662,880	+	murQ	Synpcc7942_2577	0.77	-1.1
2,662,888	-	murQ	Synpcc7942_2577	0.78	-3.1
2,662,912	-	murQ	Synpcc7942_2577	0.80	-3.3
2,662,931	+	murQ	Synpcc7942_2577	0.82	-1.7
2,662,946	+	murQ	Synpcc7942_2577	0.84	-0.1
2,662,954	-	murQ	Synpcc7942_2577	0.85	-1.1
2,662,960	+	murQ	Synpcc7942_2577	0.86	-1.7
2,662,967	+	murQ	Synpcc7942_2577	0.86	-2.7
2,662,983	+	murQ	Synpcc7942_2577	0.88	-0.7
2,663,003	+				-1.7
2,663,011	-				-1.2
2,663,011	-				-2.5
2,663,011	-				-2.4
2,663,011	-				+0.3
2,663,011	-				-0.1
2,663,011	-				-1.7
2,663,026	+				-2.7
2,663,040	+				-1.1
2,663,132	-				-0.7
2,663,146	-				-0.7
2,663,183	+		Synpcc7942_2578	0.19	-1.3
2,663,183	+		Synpcc7942_2578	0.19	-0.8
2,663,196	-		Synpcc7942_2578	0.22	-2.5
2,663,196	-		Synpcc7942_2578	0.22	+1.3
2,663,221	+		Synpcc7942_2578	0.27	-1.7
2,663,232	+		Synpcc7942_2578	0.29	-1.3
2,663,240	-		Synpcc7942_2578	0.31	-0.1
2,663,284	+		Synpcc7942_2578	0.40	-2.7
2,663,284	-		Synpcc7942_2578	0.40	-1.7
2,663,338	-		Synpcc7942_2578	0.52	-1.9
2,663,343	+		Synpcc7942_2578	0.53	-0.7
2,663,360	+		Synpcc7942_2578	0.56	-0.7
2,663,361	-		Synpcc7942_2578	0.57	-2.1
2,663,382	+				-0.7
2,663,382	+		Synpcc7942_2578	0.61	-1.7
2,663,382	+		Synpcc7942_2578	0.61	+0.4
2,663,382	+		Synpcc7942_2578	0.61	-0.2
2,663,382	+		Synpcc7942_2578	0.61	+0.1
2,663,387	+		Synpcc7942_2578	0.62	-1.7
2,663,390	-		Synpcc7942_2578	0.63	+0.7
2,663,390	-		Synpcc7942_2578	0.63	-0.6
2,663,390	-		Synpcc7942_2578	0.63	-0.7
2,663,414	+		Synpcc7942_2578	0.68	-0.9
2,663,414	+		Synpcc7942_2578	0.68	-0.9
2,663,475	+		Synpcc7942_2578	0.81	+1.1
2,663,478	+		Synpcc7942_2578	0.81	-0.6
2,663,478	+		Synpcc7942_2578	0.81	+1.1
2,663,478	+		Synpcc7942_2578	0.81	-1.0
2,663,483	+		Synpcc7942_2578	0.82	-0.7
2,663,485	+		Synpcc7942_2578	0.83	-1.7
2,663,485	+		Synpcc7942_2578	0.83	-0.7
2,663,486	-		Synpcc7942_2578	0.83	+0.3
2,663,488	+		Synpcc7942_2578	0.83	+1.5
2,663,490	+		Synpcc7942_2578	0.84	+0.6
2,663,498	-		Synpcc7942_2578	0.85	-0.6
2,663,527	+				-0.5
2,663,527	+				+1.0
2,663,528	+				-1.7
2,663,541	+				+0.1
2,663,556	-				+0.3
2,663,564	+				+0.4
2,664,438	+				-0.2
2,664,458	+				+2.7
2,664,466	-				-0.3