Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2553

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
2,631,865	+				-0.4
2,631,878	-				+0.4
2,631,905	+				-0.1
2,631,913	-				-1.1
2,631,913	-				-1.3
2,631,951	+				+0.7
2,631,974	-				+1.9
2,631,992	-				-2.7
2,631,997	+				-1.7
2,631,997	+				+1.2
2,631,997	+				-0.5
2,632,005	-				+3.0
2,632,005	-				-2.7
2,632,005	-				-0.2
2,632,005	-				+0.5
2,632,081	-				+1.7
2,632,090	+				+1.2
2,632,132	-				+0.1
2,632,195	+				-0.7
2,632,195	+				+0.2
2,632,195	+				-0.1
2,632,195	+				+0.9
2,632,289	+	hypB	Synpcc7942_2552	0.21	+0.6
2,632,338	+	hypB	Synpcc7942_2552	0.28	+0.7
2,632,338	+	hypB	Synpcc7942_2552	0.28	+1.4
2,632,345	+	hypB	Synpcc7942_2552	0.29	-1.4
2,632,346	-	hypB	Synpcc7942_2552	0.29	-1.7
2,632,346	-	hypB	Synpcc7942_2552	0.29	+1.2
2,632,346	-	hypB	Synpcc7942_2552	0.29	+2.4
2,632,346	-				-1.7
2,632,369	+	hypB	Synpcc7942_2552	0.32	-0.2
2,632,381	+	hypB	Synpcc7942_2552	0.34	+1.8
2,632,400	-	hypB	Synpcc7942_2552	0.36	-1.1
2,632,419	+	hypB	Synpcc7942_2552	0.39	+1.3
2,632,427	+	hypB	Synpcc7942_2552	0.40	-2.7
2,632,432	+	hypB	Synpcc7942_2552	0.41	-0.0
2,632,435	-	hypB	Synpcc7942_2552	0.41	+0.9
2,632,463	+	hypB	Synpcc7942_2552	0.45	-0.1
2,632,484	+	hypB	Synpcc7942_2552	0.48	-1.7
2,632,492	-	hypB	Synpcc7942_2552	0.49	-2.3
2,632,567	+	hypB	Synpcc7942_2552	0.59	+0.1
2,632,604	+	hypB	Synpcc7942_2552	0.64	-1.7
2,632,634	+	hypB	Synpcc7942_2552	0.69	-0.1
2,632,703	+	hypB	Synpcc7942_2552	0.78	+0.5
2,632,711	-	hypB	Synpcc7942_2552	0.79	+0.8
2,632,829	+				+0.7
2,632,837	-				+0.3
2,632,837	-				+0.3
2,632,837	-				+0.2
2,632,853	+				+2.2
2,632,860	+				+2.0
2,632,868	-				+1.5
2,632,887	+				-1.7
2,632,902	-	hypA	Synpcc7942_2553	0.12	+1.8
2,632,922	+	hypA	Synpcc7942_2553	0.17	-0.7
2,632,932	-	hypA	Synpcc7942_2553	0.20	+1.3
2,632,950	-	hypA	Synpcc7942_2553	0.26	+2.0
2,632,962	+	hypA	Synpcc7942_2553	0.29	-0.3
2,632,970	+	hypA	Synpcc7942_2553	0.32	+1.7
2,632,997	-	hypA	Synpcc7942_2553	0.40	-3.3
2,633,007	-	hypA	Synpcc7942_2553	0.42	+1.1
2,633,007	-	hypA	Synpcc7942_2553	0.42	-0.1
2,633,022	+	hypA	Synpcc7942_2553	0.47	+1.0
2,633,119	-	hypA	Synpcc7942_2553	0.76	+0.9
2,633,139	+	hypA	Synpcc7942_2553	0.81	+0.2
2,633,157	-	hypA	Synpcc7942_2553	0.87	+0.3
2,633,159	+	hypA	Synpcc7942_2553	0.87	+1.4
2,633,168	+				+0.7
2,633,172	-				+0.3
2,633,172	-				+0.1
2,633,194	-				+0.1
2,633,206	+				+0.8
2,633,206	+				+0.3
2,633,206	-				+0.3
2,633,260	+	hoxW	Synpcc7942_2554	0.15	-0.1
2,633,276	-	hoxW	Synpcc7942_2554	0.19	+0.4
2,633,322	+	hoxW	Synpcc7942_2554	0.29	-0.4
2,633,345	-	hoxW	Synpcc7942_2554	0.34	+1.1
2,633,357	+	hoxW	Synpcc7942_2554	0.37	+2.2
2,633,360	+	hoxW	Synpcc7942_2554	0.37	+2.3
2,633,374	+	hoxW	Synpcc7942_2554	0.40	-0.3
2,633,382	-	hoxW	Synpcc7942_2554	0.42	+0.6
2,633,383	+	hoxW	Synpcc7942_2554	0.42	+2.3
2,633,388	+	hoxW	Synpcc7942_2554	0.43	+0.3
2,633,391	-	hoxW	Synpcc7942_2554	0.44	+1.4
2,633,393	+	hoxW	Synpcc7942_2554	0.44	-0.2
2,633,393	+	hoxW	Synpcc7942_2554	0.44	+0.1
2,633,393	+	hoxW	Synpcc7942_2554	0.44	+2.3
2,633,395	+				-0.7
2,633,401	-	hoxW	Synpcc7942_2554	0.46	+0.2
2,633,497	-	hoxW	Synpcc7942_2554	0.67	+1.5
2,633,506	-	hoxW	Synpcc7942_2554	0.69	+4.1
2,633,602	+				-0.9
2,633,619	+				-0.1
2,633,627	-				-2.0
2,633,628	-				-0.7
2,633,635	+				+0.4
2,633,641	-				-0.1
2,633,653	+				-1.1
2,633,654	+				-1.1
2,633,661	-				-1.7
2,633,688	+				+1.2
2,633,688	+				+0.7
2,633,733	+				-0.3
2,633,742	-				-1.7
2,633,747	-				+1.1
2,633,760	+				-0.1
2,633,760	+				-1.7
2,633,803	+	hoxH	Synpcc7942_2555	0.10	+0.9
2,633,803	+	hoxH	Synpcc7942_2555	0.10	+0.5
2,633,811	-	hoxH	Synpcc7942_2555	0.11	+0.1
2,633,811	-	hoxH	Synpcc7942_2555	0.11	-0.1
2,633,811	-	hoxH	Synpcc7942_2555	0.11	-0.2
2,633,813	+	hoxH	Synpcc7942_2555	0.11	+2.1
2,633,821	-	hoxH	Synpcc7942_2555	0.12	+1.7
2,633,824	+	hoxH	Synpcc7942_2555	0.12	+2.4
2,633,833	-	hoxH	Synpcc7942_2555	0.12	+1.2
2,633,833	-	hoxH	Synpcc7942_2555	0.12	-0.1
2,633,833	-	hoxH	Synpcc7942_2555	0.12	+1.7
2,633,852	+	hoxH	Synpcc7942_2555	0.14	+0.4
2,633,858	-	hoxH	Synpcc7942_2555	0.14	-1.3
2,633,880	-	hoxH	Synpcc7942_2555	0.16	-1.3
2,633,885	+	hoxH	Synpcc7942_2555	0.16	+0.3
2,633,885	+	hoxH	Synpcc7942_2555	0.16	+1.4
2,633,958	-	hoxH	Synpcc7942_2555	0.21	-0.2
2,633,970	+	hoxH	Synpcc7942_2555	0.22	+1.1
2,633,978	-	hoxH	Synpcc7942_2555	0.23	+2.2
2,633,987	+	hoxH	Synpcc7942_2555	0.23	-1.7
2,633,993	+	hoxH	Synpcc7942_2555	0.24	-0.7
2,634,007	-	hoxH	Synpcc7942_2555	0.25	-0.1
2,634,027	+	hoxH	Synpcc7942_2555	0.26	-1.7
2,634,042	-	hoxH	Synpcc7942_2555	0.27	+0.5
2,634,055	+	hoxH	Synpcc7942_2555	0.28	-1.0
2,634,065	-	hoxH	Synpcc7942_2555	0.29	-0.7
2,634,081	-	hoxH	Synpcc7942_2555	0.30	+0.8
2,634,102	-	hoxH	Synpcc7942_2555	0.31	+1.2
2,634,117	-	hoxH	Synpcc7942_2555	0.32	+1.7
2,634,141	+	hoxH	Synpcc7942_2555	0.34	-1.7
2,634,149	-	hoxH	Synpcc7942_2555	0.34	-0.1
2,634,155	+	hoxH	Synpcc7942_2555	0.35	+0.1
2,634,163	-	hoxH	Synpcc7942_2555	0.35	+1.7
2,634,167	+	hoxH	Synpcc7942_2555	0.36	+1.3
2,634,201	+	hoxH	Synpcc7942_2555	0.38	+0.4