Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2466

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
2,545,853	+		Synpcc7942_2464	0.55	-1.7
2,545,866	-		Synpcc7942_2464	0.57	-1.7
2,545,907	+		Synpcc7942_2464	0.63	-2.3
2,545,924	-		Synpcc7942_2464	0.65	-2.5
2,545,925	-		Synpcc7942_2464	0.65	-1.7
2,545,925	-		Synpcc7942_2464	0.65	-1.7
2,545,936	+		Synpcc7942_2464	0.67	-2.1
2,545,944	-		Synpcc7942_2464	0.68	-2.7
2,545,999	+		Synpcc7942_2464	0.76	-1.7
2,546,007	+		Synpcc7942_2464	0.77	-3.7
2,546,010	-		Synpcc7942_2464	0.78	-2.0
2,546,015	-		Synpcc7942_2464	0.78	-2.4
2,546,026	+		Synpcc7942_2464	0.80	-2.7
2,546,044	-		Synpcc7942_2464	0.82	-3.7
2,546,049	-		Synpcc7942_2464	0.83	-5.0
2,546,054	-		Synpcc7942_2464	0.84	-0.7
2,546,054	-		Synpcc7942_2464	0.84	-2.1
2,546,076	+		Synpcc7942_2464	0.87	-4.3
2,546,081	+		Synpcc7942_2464	0.88	-2.8
2,546,130	-				+0.7
2,546,132	+				-0.7
2,546,139	-				-1.0
2,546,180	-				+3.8
2,546,181	-				+2.9
2,546,189	+				+1.1
2,546,197	-				-1.9
2,546,230	+				+0.7
2,546,231	+				+0.5
2,546,239	-				-0.5
2,546,255	+				+2.3
2,546,361	+		Synpcc7942_2465	0.10	+2.3
2,546,366	+		Synpcc7942_2465	0.12	+1.1
2,546,373	+		Synpcc7942_2465	0.15	+3.2
2,546,423	-		Synpcc7942_2465	0.35	+2.6
2,546,483	+		Synpcc7942_2465	0.59	+1.2
2,546,547	+		Synpcc7942_2465	0.84	-0.7
2,546,547	+		Synpcc7942_2465	0.84	+2.4
2,546,591	-				-2.7
2,546,615	+				+1.9
2,546,623	-				-0.1
2,546,623	-				+2.0
2,546,638	+				+2.1
2,546,649	+				+1.9
2,546,659	+				+1.3
2,546,667	-				+0.7
2,546,693	+				+0.8
2,546,693	+				+2.4
2,546,693	+				+0.8
2,546,701	-				+3.4
2,546,725	-				-1.7
2,546,751	+				+1.5
2,546,783	-				+0.2
2,546,783	-				-0.5
2,546,790	-				+1.9
2,546,794	+				+3.1
2,546,798	+				+0.8
2,546,824	-				-0.3
2,546,829	+				+1.3
2,546,830	-				+3.0
2,546,831	+				+0.9
2,546,837	-				-1.1
2,546,837	-				+3.3
2,546,837	-				+2.7
2,546,842	+				-1.1
2,546,842	+				+2.0
2,546,842	+				+2.4
2,546,864	+				+1.3
2,546,864	+				+1.7
2,546,864	+				-1.4
2,546,865	+				+1.0
2,546,892	-				+1.9
2,546,906	+				-0.1
2,546,909	-				+1.1
2,546,954	+		Synpcc7942_2466	0.15	+0.9
2,546,954	+		Synpcc7942_2466	0.15	+1.1
2,546,989	+		Synpcc7942_2466	0.20	+1.2
2,546,989	+		Synpcc7942_2466	0.20	-2.7
2,546,989	+		Synpcc7942_2466	0.20	+1.1
2,546,989	+		Synpcc7942_2466	0.20	-0.1
2,546,989	+		Synpcc7942_2466	0.20	+0.5
2,546,997	-		Synpcc7942_2466	0.21	+1.3
2,546,997	-		Synpcc7942_2466	0.21	+0.7
2,546,997	-		Synpcc7942_2466	0.21	+1.7
2,546,997	-		Synpcc7942_2466	0.21	-0.4
2,546,997	-		Synpcc7942_2466	0.21	+0.2
2,546,997	-		Synpcc7942_2466	0.21	+0.7
2,547,023	+		Synpcc7942_2466	0.24	+0.1
2,547,034	+		Synpcc7942_2466	0.26	+0.3
2,547,034	+		Synpcc7942_2466	0.26	-0.7
2,547,036	+		Synpcc7942_2466	0.26	+0.8
2,547,042	-				-0.7
2,547,042	-		Synpcc7942_2466	0.27	+0.6
2,547,042	-		Synpcc7942_2466	0.27	-0.7
2,547,068	-		Synpcc7942_2466	0.31	-0.4
2,547,134	-		Synpcc7942_2466	0.40	-1.0
2,547,163	+				-0.7
2,547,201	+		Synpcc7942_2466	0.50	-2.1
2,547,201	+		Synpcc7942_2466	0.50	-0.1
2,547,225	+		Synpcc7942_2466	0.53	+0.9
2,547,235	+		Synpcc7942_2466	0.54	-0.9
2,547,285	+		Synpcc7942_2466	0.61	-3.3
2,547,285	+		Synpcc7942_2466	0.61	+0.2
2,547,285	-		Synpcc7942_2466	0.61	-0.9
2,547,293	-		Synpcc7942_2466	0.63	-1.7
2,547,312	+		Synpcc7942_2466	0.65	-0.3
2,547,312	+		Synpcc7942_2466	0.65	+0.4
2,547,320	-		Synpcc7942_2466	0.66	+1.7
2,547,337	-		Synpcc7942_2466	0.69	-0.9
2,547,348	+		Synpcc7942_2466	0.70	+2.2
2,547,357	-		Synpcc7942_2466	0.72	+0.8
2,547,357	-		Synpcc7942_2466	0.72	-2.7
2,547,359	+		Synpcc7942_2466	0.72	-1.3
2,547,360	+		Synpcc7942_2466	0.72	+0.5
2,547,360	+		Synpcc7942_2466	0.72	+1.7
2,547,360	+		Synpcc7942_2466	0.72	+0.9
2,547,360	+		Synpcc7942_2466	0.72	-2.3
2,547,360	+		Synpcc7942_2466	0.72	-0.8
2,547,360	+		Synpcc7942_2466	0.72	-1.3
2,547,360	+		Synpcc7942_2466	0.72	+0.4
2,547,360	+		Synpcc7942_2466	0.72	-1.7
2,547,360	+		Synpcc7942_2466	0.72	+1.5
2,547,360	+		Synpcc7942_2466	0.72	+0.7
2,547,360	+		Synpcc7942_2466	0.72	+1.0
2,547,360	+		Synpcc7942_2466	0.72	-1.7
2,547,360	+		Synpcc7942_2466	0.72	+0.9
2,547,360	+		Synpcc7942_2466	0.72	+0.7
2,547,360	+		Synpcc7942_2466	0.72	-3.7
2,547,360	+		Synpcc7942_2466	0.72	+1.5
2,547,367	-		Synpcc7942_2466	0.73	+0.4
2,547,368	-		Synpcc7942_2466	0.73	+0.3
2,547,368	-		Synpcc7942_2466	0.73	+1.7
2,547,378	+		Synpcc7942_2466	0.75	+0.2
2,547,434	-		Synpcc7942_2466	0.82	+0.9
2,547,436	+		Synpcc7942_2466	0.83	+1.7
2,547,454	+		Synpcc7942_2466	0.85	-2.7
2,547,454	-		Synpcc7942_2466	0.85	+1.8
2,547,534	-				+1.3
2,547,575	+				+0.7
2,547,575	+				+0.8
2,547,583	-				-0.9
2,547,583	-				-1.7
2,548,440	+				-1.7
2,548,452	-				-3.3
2,548,459	-				+0.7
2,548,472	+				-1.1
2,548,480	-				+2.1
2,548,480	-				+1.7
2,548,480	-				+0.1
2,548,480	-				-1.7