Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2161

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
2,242,901	-	nhtA	Synpcc7942_2160	0.16	+0.9
2,242,971	-				-1.7
2,242,993	-	nhtA	Synpcc7942_2160	0.24	-4.2
2,243,097	-	nhtA	Synpcc7942_2160	0.33	-0.9
2,243,120	-	nhtA	Synpcc7942_2160	0.35	-0.8
2,243,153	-	nhtA	Synpcc7942_2160	0.38	-1.0
2,243,202	+	nhtA	Synpcc7942_2160	0.42	-0.2
2,243,210	-	nhtA	Synpcc7942_2160	0.43	-2.2
2,243,462	+	nhtA	Synpcc7942_2160	0.65	+0.7
2,243,669	-	nhtA	Synpcc7942_2160	0.83	-1.1
2,243,855	+				+0.9
2,243,855	-				-1.7
2,243,869	-				+0.1
2,243,871	+				-0.7
2,243,937	-				-0.2
2,243,949	-		Synpcc7942_2161	0.11	+1.1
2,243,985	+		Synpcc7942_2161	0.16	+1.3
2,244,069	-		Synpcc7942_2161	0.29	+1.1
2,244,196	-		Synpcc7942_2161	0.48	+0.8
2,244,201	-		Synpcc7942_2161	0.49	-0.7
2,244,201	-		Synpcc7942_2161	0.49	-2.2
2,244,201	-		Synpcc7942_2161	0.49	-1.7
2,244,210	+		Synpcc7942_2161	0.50	+0.1
2,244,395	+		Synpcc7942_2161	0.78	-2.7
2,244,431	+		Synpcc7942_2161	0.84	-1.1
2,244,431	+		Synpcc7942_2161	0.84	-2.2
2,244,431	+		Synpcc7942_2161	0.84	+2.7
2,244,478	+				-0.2
2,244,682	-				+1.0
2,244,682	-				-0.9
2,244,716	+				-1.7
2,244,740	+				+1.7
2,244,764	-		Synpcc7942_2162	0.18	+1.3
2,244,787	-		Synpcc7942_2162	0.29	+1.3
2,244,804	-		Synpcc7942_2162	0.37	-0.7
2,244,836	+		Synpcc7942_2162	0.51	-0.7
2,244,839	-		Synpcc7942_2162	0.53	-2.7
2,244,839	-		Synpcc7942_2162	0.53	+1.8
2,244,844	-		Synpcc7942_2162	0.55	-2.7
2,244,875	-		Synpcc7942_2162	0.69	+2.1
2,244,923	-				+0.4
2,244,923	-				+1.1
2,244,925	+				-0.2
2,244,925	+				-0.8
2,244,967	+				-0.7
2,244,975	-				+0.9
2,245,000	+				-0.7
2,245,033	+				-1.2
2,245,033	+				-0.5
2,245,033	+				+0.9
2,245,040	+				+0.1
2,245,041	-				-0.7
2,245,078	+				+1.3
2,245,092	-		Synpcc7942_2163	0.11	+2.2
2,245,125	-		Synpcc7942_2163	0.18	+0.2
2,245,139	+		Synpcc7942_2163	0.21	+0.7
2,245,140	-		Synpcc7942_2163	0.21	+0.7
2,245,147	-		Synpcc7942_2163	0.22	+0.3
2,245,147	-		Synpcc7942_2163	0.22	-0.2
2,245,163	-		Synpcc7942_2163	0.26	+0.3
2,245,185	+		Synpcc7942_2163	0.30	-1.7
2,245,210	+		Synpcc7942_2163	0.35	-1.3
2,245,266	+		Synpcc7942_2163	0.47	-0.4
2,245,295	+		Synpcc7942_2163	0.53	-0.1
2,245,308	-				+0.9
2,245,318	-		Synpcc7942_2163	0.57	-1.7
2,245,319	-		Synpcc7942_2163	0.58	-1.3
2,245,326	-		Synpcc7942_2163	0.59	+0.9
2,245,329	-		Synpcc7942_2163	0.60	+0.3
2,245,346	-		Synpcc7942_2163	0.63	-1.9
2,245,383	+		Synpcc7942_2163	0.71	-1.7
2,245,393	+		Synpcc7942_2163	0.73	-1.9
2,245,393	+		Synpcc7942_2163	0.73	-1.0
2,245,393	+		Synpcc7942_2163	0.73	-2.7
2,245,393	+		Synpcc7942_2163	0.73	-1.7
2,245,401	-		Synpcc7942_2163	0.74	-1.1
2,245,401	-		Synpcc7942_2163	0.74	-1.3
2,245,401	-		Synpcc7942_2163	0.74	-0.0
2,245,401	-		Synpcc7942_2163	0.74	+0.1
2,245,401	-		Synpcc7942_2163	0.74	-1.1
2,245,410	+		Synpcc7942_2163	0.76	-1.7
2,245,421	-		Synpcc7942_2163	0.79	-1.7
2,245,423	+		Synpcc7942_2163	0.79	-0.1
2,245,453	+		Synpcc7942_2163	0.85	-0.2
2,245,516	-				-0.4
2,245,520	+				+1.1
2,245,530	+				-1.7
2,245,530	+				-1.0
2,245,530	+				+1.0
2,245,530	+				+1.2
2,245,530	+				-1.3
2,245,530	+				+1.9