Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1379

Experiment: Gentamicin 0.00048828125 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Gentamicin 0.00048828125 mg/ml
1,421,382	-				-0.4
1,421,386	+				+1.0
1,421,477	-				+1.0
1,422,806	+				+0.5
1,422,824	+				-0.6
1,422,831	+				+0.3
1,422,831	+				+0.7
1,422,839	-				+0.4
1,422,847	+				+1.2
1,422,852	+				-0.6
1,422,855	-				+1.0
1,422,855	-				-0.1
1,422,892	+				-2.6
1,422,927	+				+2.2
1,422,935	-				+0.7
1,422,958	+				+0.1
1,422,958	-				-1.8
1,423,004	+				-2.2
1,423,004	+				-0.2
1,423,004	+				-0.3
1,423,012	-				-1.3
1,423,050	-				-0.0
1,423,106	+		Synpcc7942_1380	0.13	-0.0
1,423,117	+		Synpcc7942_1380	0.14	+0.3
1,423,132	-		Synpcc7942_1380	0.15	+0.2
1,423,159	+		Synpcc7942_1380	0.16	-0.9
1,423,204	+		Synpcc7942_1380	0.19	+0.4
1,423,312	+		Synpcc7942_1380	0.25	+1.7
1,423,320	-		Synpcc7942_1380	0.26	-0.0
1,423,322	+		Synpcc7942_1380	0.26	+1.4
1,423,322	+		Synpcc7942_1380	0.26	+3.0
1,423,435	+		Synpcc7942_1380	0.32	+0.7
1,423,437	+		Synpcc7942_1380	0.32	-1.6
1,423,497	+		Synpcc7942_1380	0.36	+1.0
1,423,497	+		Synpcc7942_1380	0.36	-1.6
1,423,497	+		Synpcc7942_1380	0.36	+0.8
1,423,505	-		Synpcc7942_1380	0.36	-0.0
1,423,505	-		Synpcc7942_1380	0.36	+1.0
1,423,508	+		Synpcc7942_1380	0.36	+0.1
1,423,516	-		Synpcc7942_1380	0.37	-0.0
1,423,569	+		Synpcc7942_1380	0.40	+2.1
1,423,585	-		Synpcc7942_1380	0.41	+2.1
1,423,609	-		Synpcc7942_1380	0.42	-1.0
1,423,615	+		Synpcc7942_1380	0.43	+1.5
1,423,628	-		Synpcc7942_1380	0.43	+0.1
1,423,645	+		Synpcc7942_1380	0.44	-0.6
1,423,653	+		Synpcc7942_1380	0.45	+2.5
1,423,666	+		Synpcc7942_1380	0.46	+0.3
1,423,671	+		Synpcc7942_1380	0.46	+1.0
1,423,679	-		Synpcc7942_1380	0.46	+0.1
1,423,769	-		Synpcc7942_1380	0.52	+0.4