Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS16010 and RR42_RS16015 are separated by 324 nucleotides RR42_RS16015 and RR42_RS16020 are separated by 323 nucleotides
RR42_RS16010: RR42_RS16010 - ATP-binding protein, at 3,463,207 to 3,464,295
_RS16010
RR42_RS16015: RR42_RS16015 - membrane protein, at 3,464,620 to 3,465,252
_RS16015
RR42_RS16020: RR42_RS16020 - methionyl-tRNA synthetase, at 3,465,576 to 3,467,645
_RS16020
Position (kb)
3464
3465
3466 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3464.315 kb on + strand at 3464.345 kb on - strand at 3464.352 kb on + strand at 3464.352 kb on + strand at 3464.353 kb on - strand at 3464.353 kb on - strand at 3464.353 kb on - strand at 3464.388 kb on - strand at 3464.426 kb on + strand at 3464.426 kb on + strand at 3464.436 kb on + strand at 3464.436 kb on + strand at 3464.437 kb on - strand at 3464.437 kb on - strand at 3464.482 kb on - strand at 3464.482 kb on - strand at 3464.482 kb on - strand at 3464.486 kb on + strand at 3464.487 kb on - strand at 3464.487 kb on - strand at 3464.487 kb on - strand at 3464.487 kb on - strand at 3464.487 kb on - strand at 3464.515 kb on + strand at 3464.515 kb on + strand at 3464.516 kb on - strand at 3464.533 kb on - strand at 3464.533 kb on - strand at 3464.558 kb on + strand at 3464.761 kb on - strand, within RR42_RS16015 at 3464.818 kb on + strand, within RR42_RS16015 at 3465.064 kb on + strand, within RR42_RS16015 at 3465.064 kb on + strand, within RR42_RS16015 at 3465.064 kb on + strand, within RR42_RS16015 at 3465.064 kb on + strand, within RR42_RS16015 at 3465.064 kb on + strand, within RR42_RS16015 at 3465.065 kb on - strand, within RR42_RS16015 at 3465.065 kb on - strand, within RR42_RS16015 at 3465.065 kb on - strand, within RR42_RS16015 at 3465.109 kb on + strand, within RR42_RS16015 at 3465.109 kb on + strand, within RR42_RS16015 at 3465.109 kb on + strand, within RR42_RS16015 at 3465.109 kb on + strand, within RR42_RS16015 at 3465.230 kb on - strand at 3465.262 kb on - strand at 3465.262 kb on - strand at 3465.396 kb on + strand at 3465.425 kb on + strand at 3465.488 kb on + strand at 3465.488 kb on + strand at 3465.489 kb on - strand at 3465.489 kb on - strand at 3465.489 kb on - strand at 3465.493 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 3,464,315 + -3.6 3,464,345 - +1.3 3,464,352 + +1.3 3,464,352 + -0.3 3,464,353 - -0.6 3,464,353 - +1.8 3,464,353 - +0.1 3,464,388 - -0.8 3,464,426 + -0.9 3,464,426 + -0.6 3,464,436 + +0.5 3,464,436 + +0.3 3,464,437 - -1.9 3,464,437 - -0.5 3,464,482 - +0.1 3,464,482 - -0.5 3,464,482 - +1.3 3,464,486 + +0.6 3,464,487 - -1.4 3,464,487 - -1.4 3,464,487 - +0.9 3,464,487 - -1.0 3,464,487 - -0.4 3,464,515 + +1.3 3,464,515 + -0.1 3,464,516 - +1.1 3,464,533 - -0.3 3,464,533 - -1.4 3,464,558 + +1.0 3,464,761 - RR42_RS16015 0.22 -2.7 3,464,818 + RR42_RS16015 0.31 -1.5 3,465,064 + RR42_RS16015 0.70 -0.5 3,465,064 + RR42_RS16015 0.70 -0.5 3,465,064 + RR42_RS16015 0.70 +1.0 3,465,064 + RR42_RS16015 0.70 -0.6 3,465,064 + RR42_RS16015 0.70 +0.9 3,465,065 - RR42_RS16015 0.70 -0.7 3,465,065 - RR42_RS16015 0.70 +2.3 3,465,065 - RR42_RS16015 0.70 -1.5 3,465,109 + RR42_RS16015 0.77 +0.2 3,465,109 + RR42_RS16015 0.77 -0.5 3,465,109 + RR42_RS16015 0.77 -0.7 3,465,109 + RR42_RS16015 0.77 +1.3 3,465,230 - -0.5 3,465,262 - +0.8 3,465,262 - -0.7 3,465,396 + +1.3 3,465,425 + +0.1 3,465,488 + -0.4 3,465,488 + +1.0 3,465,489 - -0.8 3,465,489 - -0.4 3,465,489 - -0.3 3,465,493 + -0.5
Or see this region's nucleotide sequence