Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14875

Experiment: L-Glutamine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Glutamine (N)
3,205,139	-		RR42_RS14870	0.46	+1.7
3,205,159	+		RR42_RS14870	0.48	-0.8
3,205,160	-		RR42_RS14870	0.48	+1.2
3,205,160	-		RR42_RS14870	0.48	-1.2
3,205,436	-		RR42_RS14870	0.71	+0.0
3,205,450	+		RR42_RS14870	0.72	-0.2
3,205,450	+		RR42_RS14870	0.72	+0.2
3,205,450	+		RR42_RS14870	0.72	+2.9
3,205,472	-		RR42_RS14870	0.74	-0.3
3,205,490	-		RR42_RS14870	0.75	-0.4
3,205,490	-		RR42_RS14870	0.75	-2.1
3,205,490	-		RR42_RS14870	0.75	+0.6
3,205,543	+		RR42_RS14870	0.80	+1.0
3,205,543	+		RR42_RS14870	0.80	-0.5
3,205,546	+		RR42_RS14870	0.80	-1.0
3,205,546	+		RR42_RS14870	0.80	+0.2
3,205,547	-		RR42_RS14870	0.80	-0.6
3,205,547	-		RR42_RS14870	0.80	+0.4
3,205,547	-		RR42_RS14870	0.80	+0.0
3,205,547	-		RR42_RS14870	0.80	+0.7
3,205,547	-		RR42_RS14870	0.80	+0.2
3,205,582	+		RR42_RS14870	0.83	-0.3
3,205,626	-		RR42_RS14870	0.87	-0.1
3,205,651	+		RR42_RS14870	0.89	-0.9
3,205,685	-				-1.3
3,205,715	-				-0.2
3,205,717	+				-0.5
3,205,717	+				-0.1
3,205,717	+				-2.4
3,205,718	-				+0.1
3,205,718	-				-0.2
3,205,718	-				-0.1
3,205,969	+				+0.4
3,205,970	-				+0.5
3,206,047	+				+0.6
3,206,047	+				-1.3
3,206,260	+				-1.4
3,206,260	+				-0.5
3,206,260	+				+1.7
3,206,260	+				-1.0
3,206,261	-				-1.3
3,206,309	-				-1.3
3,206,564	-				-2.6
3,206,656	+				+0.5
3,206,657	-				+0.6
3,206,689	+				+0.5
3,206,690	-				-0.2
3,206,690	-				-0.4
3,206,798	+				-0.5
3,206,821	+				-0.9
3,206,822	-				+0.7
3,206,921	-				-0.1
3,207,262	+		RR42_RS14875	0.14	-0.9
3,207,427	+		RR42_RS14875	0.15	+0.3
3,207,427	+		RR42_RS14875	0.15	-0.3
3,207,427	+		RR42_RS14875	0.15	+1.0
3,207,428	-		RR42_RS14875	0.15	-0.2
3,207,436	+		RR42_RS14875	0.15	-1.4
3,207,437	-		RR42_RS14875	0.15	-1.4
3,207,437	-		RR42_RS14875	0.15	+1.1
3,207,539	+		RR42_RS14875	0.16	-1.0
3,207,539	+				+2.3
3,207,539	+		RR42_RS14875	0.16	+0.1
3,207,540	-		RR42_RS14875	0.16	+0.7
3,207,540	-		RR42_RS14875	0.16	-0.6
3,207,540	-		RR42_RS14875	0.16	-0.4
3,207,749	+		RR42_RS14875	0.19	+0.4
3,207,749	+		RR42_RS14875	0.19	-1.5
3,207,749	+		RR42_RS14875	0.19	+0.4
3,207,750	-		RR42_RS14875	0.19	+0.5
3,207,750	-		RR42_RS14875	0.19	-0.6
3,207,750	-		RR42_RS14875	0.19	-0.3
3,207,751	+		RR42_RS14875	0.19	-1.4
3,207,751	+		RR42_RS14875	0.19	+0.2
3,207,751	+		RR42_RS14875	0.19	-0.8
3,207,751	+		RR42_RS14875	0.19	-0.4
3,207,751	+		RR42_RS14875	0.19	-1.0
3,207,752	-		RR42_RS14875	0.19	+0.4
3,207,752	-		RR42_RS14875	0.19	-0.1
3,207,752	-		RR42_RS14875	0.19	+0.6
3,207,752	-		RR42_RS14875	0.19	+0.6
3,207,752	-		RR42_RS14875	0.19	+1.3
3,207,752	-		RR42_RS14875	0.19	+0.3
3,207,907	+		RR42_RS14875	0.20	+1.3
3,207,907	+		RR42_RS14875	0.20	-1.4
3,207,908	-		RR42_RS14875	0.20	+0.1
3,207,908	-		RR42_RS14875	0.20	+0.9
3,207,908	-		RR42_RS14875	0.20	-0.7
3,207,908	-		RR42_RS14875	0.20	-1.5
3,208,023	+		RR42_RS14875	0.22	+0.2
3,208,024	-		RR42_RS14875	0.22	-0.4
3,208,024	-		RR42_RS14875	0.22	+0.7
3,208,024	-		RR42_RS14875	0.22	+0.7
3,208,141	+		RR42_RS14875	0.23	+0.5
3,208,141	+		RR42_RS14875	0.23	-1.2
3,208,166	+		RR42_RS14875	0.23	+1.0
3,208,166	+		RR42_RS14875	0.23	+0.5
3,208,166	+		RR42_RS14875	0.23	-0.4
3,208,167	-		RR42_RS14875	0.23	+0.3
3,208,168	+		RR42_RS14875	0.23	+0.0
3,208,168	+		RR42_RS14875	0.23	-0.7
3,208,168	+		RR42_RS14875	0.23	-0.6
3,208,168	+		RR42_RS14875	0.23	-0.5
3,208,169	-		RR42_RS14875	0.23	-0.9
3,208,169	-		RR42_RS14875	0.23	+0.3
3,208,277	-		RR42_RS14875	0.24	+0.7
3,208,277	-		RR42_RS14875	0.24	+0.9
3,208,393	+		RR42_RS14875	0.25	+0.5
3,208,439	-		RR42_RS14875	0.26	+0.0
3,208,444	-		RR42_RS14875	0.26	-1.1
3,208,444	-		RR42_RS14875	0.26	-0.5
3,208,444	-		RR42_RS14875	0.26	-1.3
3,208,549	+		RR42_RS14875	0.27	-0.2
3,208,549	+		RR42_RS14875	0.27	-1.2
3,208,549	+		RR42_RS14875	0.27	-0.2
3,208,549	+		RR42_RS14875	0.27	-0.1
3,208,549	+		RR42_RS14875	0.27	+0.1
3,208,550	-		RR42_RS14875	0.27	+0.1
3,208,550	-		RR42_RS14875	0.27	-0.4
3,208,550	-		RR42_RS14875	0.27	-1.4
3,208,550	-		RR42_RS14875	0.27	+0.1
3,208,550	-		RR42_RS14875	0.27	-1.2
3,208,550	-		RR42_RS14875	0.27	+0.5
3,208,603	+		RR42_RS14875	0.28	-0.0
3,208,604	-		RR42_RS14875	0.28	+1.3
3,209,023	-		RR42_RS14875	0.32	+0.8
3,209,079	+		RR42_RS14875	0.33	+0.1
3,209,176	+		RR42_RS14875	0.34	-0.1
3,209,177	-		RR42_RS14875	0.34	-0.6
3,209,408	-		RR42_RS14875	0.36	+0.6
3,209,549	-		RR42_RS14875	0.38	-0.3
3,209,621	+		RR42_RS14875	0.38	-2.4
3,209,644	+		RR42_RS14875	0.39	-2.5
3,209,645	-		RR42_RS14875	0.39	-1.9
3,209,666	-		RR42_RS14875	0.39	+0.7
3,209,713	+		RR42_RS14875	0.39	+2.9
3,209,713	+		RR42_RS14875	0.39	-0.2
3,209,966	-		RR42_RS14875	0.42	-1.1
3,210,277	+		RR42_RS14875	0.45	+0.9
3,210,304	+		RR42_RS14875	0.45	-0.2
3,210,305	-		RR42_RS14875	0.45	-1.6
3,210,487	+		RR42_RS14875	0.47	-1.2
3,210,488	-		RR42_RS14875	0.47	-2.3
3,210,488	-		RR42_RS14875	0.47	-1.6
3,210,488	-		RR42_RS14875	0.47	+0.9
3,210,503	-		RR42_RS14875	0.48	+1.1
3,210,503	-		RR42_RS14875	0.48	+0.5
3,210,600	+		RR42_RS14875	0.49	+1.8
3,210,601	-		RR42_RS14875	0.49	-1.1
3,210,624	-		RR42_RS14875	0.49	+1.3
3,210,803	-		RR42_RS14875	0.51	+0.2
3,210,808	+		RR42_RS14875	0.51	+0.7
3,210,848	-		RR42_RS14875	0.51	+0.3
3,211,118	-		RR42_RS14875	0.54	-1.5
3,211,565	-		RR42_RS14875	0.59	+0.3
3,211,630	+		RR42_RS14875	0.59	-0.8
3,211,631	-		RR42_RS14875	0.59	-0.2
3,211,631	-		RR42_RS14875	0.59	+1.7
3,211,636	+		RR42_RS14875	0.59	-1.1
3,211,636	+		RR42_RS14875	0.59	+0.5
3,211,636	+		RR42_RS14875	0.59	-0.7
3,211,637	-		RR42_RS14875	0.59	-1.0
3,211,738	+		RR42_RS14875	0.60	+1.3
3,211,835	-		RR42_RS14875	0.61	-2.0
3,211,835	-		RR42_RS14875	0.61	+2.0
3,211,846	+		RR42_RS14875	0.62	-0.7
3,211,847	-		RR42_RS14875	0.62	-1.2
3,211,847	-		RR42_RS14875	0.62	-0.6
3,211,900	-		RR42_RS14875	0.62	-0.6
3,212,026	+		RR42_RS14875	0.63	-0.1
3,212,027	-		RR42_RS14875	0.63	-1.0
3,212,027	-		RR42_RS14875	0.63	-1.9
3,212,027	-		RR42_RS14875	0.63	+0.6
3,212,180	-		RR42_RS14875	0.65	+1.0
3,212,180	-		RR42_RS14875	0.65	+2.3
3,212,195	-		RR42_RS14875	0.65	-2.9
3,212,195	-		RR42_RS14875	0.65	-0.8
3,212,416	+		RR42_RS14875	0.68	+0.1
3,212,416	+		RR42_RS14875	0.68	-0.7
3,212,417	-		RR42_RS14875	0.68	-0.5
3,212,543	-		RR42_RS14875	0.69	-0.2
3,212,786	-		RR42_RS14875	0.71	+0.7
3,212,812	+		RR42_RS14875	0.72	+0.3
3,212,989	+		RR42_RS14875	0.74	+0.4
3,213,063	-		RR42_RS14875	0.74	-0.3
3,213,070	+		RR42_RS14875	0.74	-0.2
3,213,071	-		RR42_RS14875	0.74	-0.6
3,213,071	-		RR42_RS14875	0.74	+0.8
3,213,071	-		RR42_RS14875	0.74	-1.0
3,213,182	+		RR42_RS14875	0.76	+1.2
3,213,187	+		RR42_RS14875	0.76	+0.4
3,213,188	-		RR42_RS14875	0.76	-0.2
3,213,191	+		RR42_RS14875	0.76	-0.4
3,213,191	+		RR42_RS14875	0.76	-1.2
3,213,191	+		RR42_RS14875	0.76	+0.7
3,213,191	+		RR42_RS14875	0.76	-1.4
3,213,191	+		RR42_RS14875	0.76	+0.6
3,213,192	-		RR42_RS14875	0.76	+0.2
3,213,192	-		RR42_RS14875	0.76	+1.1
3,213,244	-		RR42_RS14875	0.76	-0.1
3,213,397	+		RR42_RS14875	0.78	-1.3
3,213,397	+		RR42_RS14875	0.78	-0.1
3,213,398	-		RR42_RS14875	0.78	-0.1
3,213,398	-		RR42_RS14875	0.78	+0.2
3,213,398	-		RR42_RS14875	0.78	+0.7
3,213,400	+		RR42_RS14875	0.78	-1.8
3,213,401	-		RR42_RS14875	0.78	-0.7
3,213,401	-		RR42_RS14875	0.78	+0.3
3,213,443	-		RR42_RS14875	0.78	+0.4
3,213,443	-		RR42_RS14875	0.78	+1.0
3,213,637	+		RR42_RS14875	0.80	-1.7
3,213,767	-		RR42_RS14875	0.82	+0.6
3,213,784	+		RR42_RS14875	0.82	-0.5
3,214,025	+		RR42_RS14875	0.84	-1.9
3,214,739	+				-1.5
3,214,739	+				-1.1
3,214,793	-				-0.7
3,215,009	-				-0.1
3,215,186	-				+0.4
3,215,265	-				+1.7
3,215,396	-				-0.7
3,215,492	+				+0.6
3,215,492	+				-0.1
3,215,493	-				-0.7
3,215,493	-				-0.6
3,215,495	-				+1.0
3,215,558	-				-0.6
3,215,701	+				-0.2
3,215,888	-				-1.2
3,215,897	+				-0.5
3,215,898	-				-1.2
3,215,898	-				-1.1
3,216,018	-				+0.7
3,216,130	+				+0.3
3,216,131	-				+0.1
3,216,181	+				+0.2
3,216,193	+				-0.3
3,216,227	-				-1.9
3,216,457	+				+2.3
3,216,509	+				-1.3