Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS11710 and RR42_RS11715 are separated by 797 nucleotides
RR42_RS11710: RR42_RS11710 - hypothetical protein, at 2,506,189 to 2,506,416
_RS11710
RR42_RS11715: RR42_RS11715 - DNA-binding protein, at 2,507,214 to 2,507,735
_RS11715
Position (kb)
2507
2508 Strain fitness (log2 ratio)
-1
0
1
2 at 2506.458 kb on + strand at 2506.459 kb on - strand at 2506.459 kb on - strand at 2506.659 kb on + strand at 2506.660 kb on - strand at 2506.660 kb on - strand at 2506.960 kb on + strand at 2506.961 kb on - strand at 2506.961 kb on - strand at 2506.967 kb on - strand at 2507.126 kb on - strand at 2507.126 kb on - strand at 2507.129 kb on + strand at 2507.130 kb on - strand at 2507.130 kb on - strand at 2507.147 kb on - strand at 2507.148 kb on + strand at 2507.148 kb on + strand at 2507.148 kb on + strand at 2507.148 kb on + strand at 2507.149 kb on - strand at 2507.198 kb on + strand at 2507.198 kb on + strand at 2507.220 kb on + strand at 2507.240 kb on - strand at 2507.346 kb on + strand, within RR42_RS11715 at 2507.367 kb on + strand, within RR42_RS11715 at 2507.463 kb on + strand, within RR42_RS11715 at 2507.463 kb on + strand, within RR42_RS11715 at 2507.463 kb on + strand, within RR42_RS11715 at 2507.464 kb on - strand, within RR42_RS11715 at 2507.784 kb on + strand at 2507.810 kb on - strand at 2507.851 kb on + strand at 2507.862 kb on + strand at 2507.897 kb on + strand at 2507.907 kb on - strand at 2508.020 kb on + strand at 2508.020 kb on + strand at 2508.126 kb on + strand at 2508.207 kb on + strand at 2508.299 kb on + strand at 2508.510 kb on + strand at 2508.510 kb on + strand at 2508.511 kb on - strand at 2508.511 kb on - strand at 2508.539 kb on + strand at 2508.539 kb on + strand at 2508.540 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 2,506,458 + -0.4 2,506,459 - -1.7 2,506,459 - -0.6 2,506,659 + -0.6 2,506,660 - -0.3 2,506,660 - +0.5 2,506,960 + +1.3 2,506,961 - +2.0 2,506,961 - +1.7 2,506,967 - -0.8 2,507,126 - -0.8 2,507,126 - -1.5 2,507,129 + -0.4 2,507,130 - -1.0 2,507,130 - -0.6 2,507,147 - -0.0 2,507,148 + -0.3 2,507,148 + -0.1 2,507,148 + -0.0 2,507,148 + -0.5 2,507,149 - -0.2 2,507,198 + +1.0 2,507,198 + -0.0 2,507,220 + +0.2 2,507,240 - -0.3 2,507,346 + RR42_RS11715 0.25 -0.6 2,507,367 + RR42_RS11715 0.29 -1.1 2,507,463 + RR42_RS11715 0.48 +0.3 2,507,463 + RR42_RS11715 0.48 +1.3 2,507,463 + RR42_RS11715 0.48 -0.6 2,507,464 - RR42_RS11715 0.48 -1.0 2,507,784 + -0.3 2,507,810 - -0.8 2,507,851 + +2.0 2,507,862 + +0.0 2,507,897 + +0.4 2,507,907 - -1.1 2,508,020 + -0.8 2,508,020 + -0.6 2,508,126 + -0.7 2,508,207 + +2.3 2,508,299 + +0.3 2,508,510 + +2.1 2,508,510 + -0.1 2,508,511 - -1.2 2,508,511 - -1.0 2,508,539 + -1.1 2,508,539 + -0.9 2,508,540 - +0.5
Or see this region's nucleotide sequence