Experiment: L-Glutamine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt RR42_RS02820 and RR42_RS02825 are separated by 36 nucleotides RR42_RS02825 and RR42_RS02830 overlap by 4 nucleotides RR42_RS02830 and RR42_RS02835 are separated by 480 nucleotides
RR42_RS02820: RR42_RS02820 - glycyl-tRNA synthetase subunit beta, at 626,955 to 629,087
_RS02820
RR42_RS02825: RR42_RS02825 - hypothetical protein, at 629,124 to 629,780
_RS02825
RR42_RS02830: RR42_RS02830 - glycyl-tRNA synthetase subunit alpha, at 629,777 to 630,727
_RS02830
RR42_RS02835: RR42_RS02835 - acyltransferase, at 631,208 to 632,815
_RS02835
Position (kb) 629
630
631 Strain fitness (log2 ratio) -1
0
1 at 629.144 kb on + strand at 629.144 kb on + strand at 629.145 kb on - strand at 629.145 kb on - strand at 629.145 kb on - strand at 629.390 kb on - strand, within RR42_RS02825 at 629.390 kb on - strand, within RR42_RS02825 at 629.390 kb on - strand, within RR42_RS02825 at 629.393 kb on - strand, within RR42_RS02825 at 629.393 kb on - strand, within RR42_RS02825 at 629.666 kb on - strand, within RR42_RS02825 at 630.739 kb on - strand at 630.742 kb on - strand at 630.742 kb on - strand at 630.879 kb on + strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.880 kb on - strand at 630.963 kb on + strand at 630.963 kb on + strand at 630.999 kb on + strand at 631.007 kb on - strand at 631.010 kb on - strand at 631.096 kb on + strand at 631.097 kb on - strand at 631.204 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Glutamine (N) remove 629,144 + +0.8 629,144 + -1.6 629,145 - +0.7 629,145 - +0.3 629,145 - +0.6 629,390 - RR42_RS02825 0.40 -0.1 629,390 - RR42_RS02825 0.40 -1.2 629,390 - RR42_RS02825 0.40 -0.4 629,393 - RR42_RS02825 0.41 +0.5 629,393 - RR42_RS02825 0.41 -0.6 629,666 - RR42_RS02825 0.82 +0.0 630,739 - +0.1 630,742 - -0.5 630,742 - -0.6 630,879 + -0.1 630,880 - -1.2 630,880 - +1.0 630,880 - -0.8 630,880 - +0.3 630,880 - -0.2 630,880 - -1.4 630,880 - +1.1 630,880 - +1.0 630,963 + +0.3 630,963 + +0.1 630,999 + +0.3 631,007 - -0.5 631,010 - +0.6 631,096 + +1.1 631,097 - +0.8 631,204 - -0.7
Or see this region's nucleotide sequence