Strain Fitness in Caulobacter crescentus NA1000 around CCNA_02099

Experiment: PYE with Gentamicin 0.0005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	PYE with Gentamicin 0.0005 mg/ml
2,247,494	+				+1.8
2,247,502	-				+0.2
2,247,512	+				+1.4
2,247,526	+				+1.5
2,247,532	+				+1.6
2,247,537	+				+1.2
2,247,699	+		CCNA_02098	0.12	+0.6
2,247,707	-		CCNA_02098	0.13	-2.5
2,247,745	+		CCNA_02098	0.18	+0.5
2,247,753	-		CCNA_02098	0.18	-0.4
2,247,762	+		CCNA_02098	0.19	+0.9
2,247,853	-		CCNA_02098	0.30	+1.9
2,247,853	-		CCNA_02098	0.30	-1.0
2,247,867	+		CCNA_02098	0.31	+0.9
2,247,882	+		CCNA_02098	0.33	+2.2
2,247,905	+		CCNA_02098	0.35	+1.1
2,247,945	-		CCNA_02098	0.40	-0.0
2,247,976	-		CCNA_02098	0.43	+0.6
2,247,998	-		CCNA_02098	0.46	-0.4
2,248,026	+		CCNA_02098	0.49	+1.0
2,248,039	-		CCNA_02098	0.50	-0.1
2,248,122	+		CCNA_02098	0.60	+1.6
2,248,196	+		CCNA_02098	0.68	+1.8
2,248,204	-		CCNA_02098	0.69	+0.2
2,248,206	+		CCNA_02098	0.69	+1.7
2,248,206	+		CCNA_02098	0.69	+1.9
2,248,219	-		CCNA_02098	0.70	-0.6
2,248,262	-		CCNA_02098	0.75	+0.4
2,248,264	+		CCNA_02098	0.75	+1.7
2,248,272	-		CCNA_02098	0.76	-0.0
2,248,272	-		CCNA_02098	0.76	+0.3
2,248,286	+		CCNA_02098	0.78	+1.7
2,248,286	+		CCNA_02098	0.78	+1.4
2,248,286	+		CCNA_02098	0.78	+3.3
2,248,286	+		CCNA_02098	0.78	+1.3
2,248,294	-		CCNA_02098	0.79	+0.1
2,248,299	-		CCNA_02098	0.79	+0.7
2,248,301	+		CCNA_02098	0.79	+1.4
2,248,301	+		CCNA_02098	0.79	+1.6
2,248,301	+		CCNA_02098	0.79	+1.0
2,248,301	+		CCNA_02098	0.79	+1.1
2,248,301	+				+2.8
2,248,301	+		CCNA_02098	0.79	+1.6
2,248,301	+		CCNA_02098	0.79	+1.4
2,248,301	+		CCNA_02098	0.79	+0.8
2,248,301	+		CCNA_02098	0.79	+0.8
2,248,309	-		CCNA_02098	0.80	+1.7
2,248,309	-		CCNA_02098	0.80	+0.5
2,248,309	-		CCNA_02098	0.80	-2.0
2,248,309	-		CCNA_02098	0.80	+1.0
2,248,309	-		CCNA_02098	0.80	-0.5
2,248,309	-		CCNA_02098	0.80	-1.0
2,248,315	-		CCNA_02098	0.81	+0.9
2,248,329	+		CCNA_02098	0.83	+1.1
2,248,341	+		CCNA_02098	0.84	+1.6
2,248,369	+		CCNA_02098	0.87	+1.9
2,248,387	-		CCNA_02098	0.89	+0.7
2,248,416	+				+0.9
2,248,498	-				-0.9
2,248,592	+				+0.1
2,248,592	+				-0.0
2,248,600	-				+0.8
2,248,605	+				+0.9
2,248,638	+		CCNA_02099	0.11	-0.1
2,248,638	+		CCNA_02099	0.11	+0.6
2,248,638	+		CCNA_02099	0.11	-2.1
2,248,646	-		CCNA_02099	0.12	+0.8
2,248,646	-		CCNA_02099	0.12	+1.0
2,248,656	-		CCNA_02099	0.12	+0.9
2,248,656	-		CCNA_02099	0.12	+1.8
2,248,666	-		CCNA_02099	0.13	+1.4
2,248,666	-		CCNA_02099	0.13	+1.1
2,248,688	-		CCNA_02099	0.15	+0.5
2,248,729	-		CCNA_02099	0.18	+0.9
2,248,783	-		CCNA_02099	0.21	+0.9
2,248,813	+		CCNA_02099	0.23	-0.3
2,248,816	-		CCNA_02099	0.24	+0.6
2,248,816	-		CCNA_02099	0.24	+0.7
2,248,818	+		CCNA_02099	0.24	+0.8
2,248,826	-		CCNA_02099	0.24	+0.7
2,248,833	+		CCNA_02099	0.25	+0.5
2,248,833	+		CCNA_02099	0.25	-1.3
2,248,841	-		CCNA_02099	0.25	+1.1
2,248,841	-		CCNA_02099	0.25	+0.6
2,248,884	-		CCNA_02099	0.28	+0.7
2,248,901	+		CCNA_02099	0.30	+1.8
2,248,909	-		CCNA_02099	0.30	+1.0
2,248,934	-		CCNA_02099	0.32	+0.5
2,248,934	-		CCNA_02099	0.32	+1.9
2,248,986	-		CCNA_02099	0.36	+1.3
2,248,993	-		CCNA_02099	0.36	+0.3
2,249,026	-		CCNA_02099	0.38	+0.7
2,249,039	+		CCNA_02099	0.39	-0.1
2,249,059	-		CCNA_02099	0.41	+1.6
2,249,227	-		CCNA_02099	0.53	+1.4
2,249,227	-		CCNA_02099	0.53	+0.4
2,249,227	-		CCNA_02099	0.53	+1.1
2,249,267	+		CCNA_02099	0.56	-0.8
2,249,329	-		CCNA_02099	0.60	+0.3
2,249,359	+		CCNA_02099	0.62	-0.9
2,249,362	-		CCNA_02099	0.62	+0.7
2,249,367	-		CCNA_02099	0.63	+0.8
2,249,377	+		CCNA_02099	0.63	-0.5
2,249,385	-		CCNA_02099	0.64	-0.2
2,249,390	+		CCNA_02099	0.64	+1.2
2,249,398	-		CCNA_02099	0.65	+0.0
2,249,426	-		CCNA_02099	0.67	+1.2
2,249,428	+		CCNA_02099	0.67	-0.5
2,249,474	+		CCNA_02099	0.70	+0.7
2,249,474	+		CCNA_02099	0.70	+0.8
2,249,489	-		CCNA_02099	0.71	-0.3
2,249,502	+		CCNA_02099	0.72	-0.3
2,249,502	+		CCNA_02099	0.72	+0.3
2,249,510	-		CCNA_02099	0.73	-0.5
2,249,516	+		CCNA_02099	0.73	-1.3
2,249,535	+		CCNA_02099	0.74	+1.0
2,249,567	+		CCNA_02099	0.77	-0.6
2,249,575	-		CCNA_02099	0.77	-0.3
2,249,575	-		CCNA_02099	0.77	+0.4
2,249,575	-		CCNA_02099	0.77	-0.5
2,249,595	-		CCNA_02099	0.79	+1.1
2,249,619	+		CCNA_02099	0.80	-0.2
2,249,619	+		CCNA_02099	0.80	+1.2
2,249,619	+		CCNA_02099	0.80	+0.3
2,249,627	-		CCNA_02099	0.81	+1.2
2,249,638	+		CCNA_02099	0.82	-1.1
2,249,668	-		CCNA_02099	0.84	-0.1
2,249,679	+		CCNA_02099	0.85	-0.4
2,249,741	+		CCNA_02099	0.89	-3.2
2,249,741	+		CCNA_02099	0.89	+0.4
2,249,741	+		CCNA_02099	0.89	+1.1
2,249,749	-		CCNA_02099	0.90	+0.4
2,249,784	-				-0.6
2,249,801	-				+2.3
2,249,816	+				-0.3
2,249,825	-				+0.9
2,249,880	+				-2.4
2,249,880	+				-1.2
2,249,883	-				+0.2
2,249,883	-				+1.2
2,249,888	-				+0.6
2,249,903	+				-0.8
2,249,955	-				+0.8
2,249,960	-				+1.4
2,250,041	-				-0.2
2,250,048	-				-0.2
2,250,179	-		CCNA_02100	0.34	-0.1
2,250,187	-		CCNA_02100	0.36	-0.1
2,250,212	-		CCNA_02100	0.41	+0.7
2,250,221	-		CCNA_02100	0.43	+0.6
2,250,231	-		CCNA_02100	0.45	+0.3
2,250,231	-		CCNA_02100	0.45	+0.6
2,250,248	+		CCNA_02100	0.49	+0.6
2,250,272	+		CCNA_02100	0.54	-0.3
2,250,363	+		CCNA_02100	0.72	-2.2
2,250,364	+		CCNA_02100	0.73	-0.1
2,250,382	+		CCNA_02100	0.76	-1.0
2,250,390	-		CCNA_02100	0.78	-0.3
2,250,409	+		CCNA_02100	0.82	-1.5
2,250,453	+				-0.1
2,250,461	-				-0.8
2,250,461	-				+0.9
2,250,530	+				-1.1
2,250,696	-		CCNA_02101	0.22	-1.3
2,250,708	-		CCNA_02101	0.25	+1.2
2,250,832	+		CCNA_02101	0.57	+0.1
2,250,841	-		CCNA_02101	0.59	-0.4