Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA265_RS02455 and CA265_RS02460 are separated by 228 nucleotides CA265_RS02460 and CA265_RS02465 are separated by 96 nucleotides CA265_RS02465 and CA265_RS02470 are separated by 26 nucleotides
CA265_RS02455: CA265_RS02455 - Fe-S oxidoreductase, at 606,384 to 607,679
_RS02455
CA265_RS02460: CA265_RS02460 - tRNA-Phe, at 607,908 to 607,983
_RS02460
CA265_RS02465: CA265_RS02465 - glycosyl hydrolase family 43, at 608,080 to 609,570
_RS02465
CA265_RS02470: CA265_RS02470 - hypothetical protein, at 609,597 to 611,096
_RS02470
Position (kb) 608
609
610 Strain fitness (log2 ratio) -2
-1
0
1
2 at 607.685 kb on - strand at 607.685 kb on - strand at 607.714 kb on - strand at 607.714 kb on - strand at 607.777 kb on + strand at 607.928 kb on - strand, within CA265_RS02460 at 608.028 kb on - strand at 608.067 kb on + strand at 608.068 kb on - strand at 608.205 kb on + strand at 608.206 kb on - strand at 608.206 kb on - strand at 608.208 kb on + strand at 608.228 kb on + strand at 608.307 kb on - strand, within CA265_RS02465 at 608.409 kb on + strand, within CA265_RS02465 at 608.449 kb on + strand, within CA265_RS02465 at 608.463 kb on + strand, within CA265_RS02465 at 608.464 kb on - strand, within CA265_RS02465 at 608.472 kb on + strand, within CA265_RS02465 at 608.556 kb on + strand, within CA265_RS02465 at 608.615 kb on - strand, within CA265_RS02465 at 608.662 kb on - strand, within CA265_RS02465 at 608.677 kb on + strand, within CA265_RS02465 at 608.678 kb on - strand, within CA265_RS02465 at 608.678 kb on - strand, within CA265_RS02465 at 608.682 kb on - strand, within CA265_RS02465 at 608.726 kb on + strand, within CA265_RS02465 at 608.727 kb on - strand, within CA265_RS02465 at 608.762 kb on - strand, within CA265_RS02465 at 608.765 kb on + strand, within CA265_RS02465 at 608.783 kb on + strand, within CA265_RS02465 at 608.856 kb on - strand, within CA265_RS02465 at 608.890 kb on - strand, within CA265_RS02465 at 608.890 kb on - strand, within CA265_RS02465 at 608.890 kb on - strand, within CA265_RS02465 at 608.912 kb on + strand, within CA265_RS02465 at 608.997 kb on - strand, within CA265_RS02465 at 609.024 kb on + strand, within CA265_RS02465 at 609.024 kb on + strand, within CA265_RS02465 at 609.037 kb on - strand, within CA265_RS02465 at 609.082 kb on + strand, within CA265_RS02465 at 609.128 kb on + strand, within CA265_RS02465 at 609.154 kb on - strand, within CA265_RS02465 at 609.369 kb on - strand, within CA265_RS02465 at 609.375 kb on + strand, within CA265_RS02465 at 609.376 kb on - strand, within CA265_RS02465 at 609.384 kb on + strand, within CA265_RS02465 at 609.419 kb on + strand, within CA265_RS02465 at 609.423 kb on - strand at 609.464 kb on - strand at 609.544 kb on + strand at 609.550 kb on - strand at 609.553 kb on + strand at 609.585 kb on + strand at 609.586 kb on - strand at 609.588 kb on - strand at 609.624 kb on + strand at 609.636 kb on + strand at 609.649 kb on + strand at 609.677 kb on - strand at 609.677 kb on - strand at 609.682 kb on - strand at 609.682 kb on - strand at 609.684 kb on - strand at 609.684 kb on - strand at 609.695 kb on + strand at 609.696 kb on - strand at 609.696 kb on - strand at 609.696 kb on - strand at 609.788 kb on + strand, within CA265_RS02470 at 609.844 kb on + strand, within CA265_RS02470 at 609.856 kb on + strand at 609.856 kb on + strand, within CA265_RS02470 at 609.857 kb on - strand, within CA265_RS02470 at 610.003 kb on - strand, within CA265_RS02470 at 610.012 kb on - strand, within CA265_RS02470 at 610.015 kb on - strand, within CA265_RS02470 at 610.055 kb on + strand, within CA265_RS02470 at 610.056 kb on - strand, within CA265_RS02470 at 610.057 kb on + strand, within CA265_RS02470 at 610.058 kb on - strand, within CA265_RS02470 at 610.076 kb on + strand, within CA265_RS02470 at 610.077 kb on - strand, within CA265_RS02470 at 610.136 kb on + strand, within CA265_RS02470 at 610.138 kb on + strand, within CA265_RS02470 at 610.170 kb on + strand, within CA265_RS02470 at 610.185 kb on - strand, within CA265_RS02470 at 610.206 kb on - strand, within CA265_RS02470 at 610.245 kb on + strand, within CA265_RS02470 at 610.369 kb on + strand, within CA265_RS02470 at 610.373 kb on + strand, within CA265_RS02470 at 610.373 kb on + strand, within CA265_RS02470 at 610.373 kb on + strand, within CA265_RS02470 at 610.374 kb on - strand, within CA265_RS02470 at 610.374 kb on - strand, within CA265_RS02470 at 610.374 kb on - strand, within CA265_RS02470 at 610.463 kb on + strand, within CA265_RS02470 at 610.514 kb on + strand, within CA265_RS02470 at 610.534 kb on + strand, within CA265_RS02470 at 610.545 kb on + strand, within CA265_RS02470 at 610.557 kb on - strand, within CA265_RS02470 at 610.557 kb on - strand, within CA265_RS02470
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 607,685 - +0.5 607,685 - -0.6 607,714 - -1.5 607,714 - +0.1 607,777 + -0.5 607,928 - CA265_RS02460 0.26 -1.2 608,028 - +0.1 608,067 + -0.3 608,068 - -0.4 608,205 + -0.4 608,206 - +0.4 608,206 - +0.3 608,208 + +0.4 608,228 + -1.5 608,307 - CA265_RS02465 0.15 +1.2 608,409 + CA265_RS02465 0.22 -0.0 608,449 + CA265_RS02465 0.25 +0.0 608,463 + CA265_RS02465 0.26 -1.3 608,464 - CA265_RS02465 0.26 +0.1 608,472 + CA265_RS02465 0.26 -0.3 608,556 + CA265_RS02465 0.32 -1.5 608,615 - CA265_RS02465 0.36 +0.1 608,662 - CA265_RS02465 0.39 -0.6 608,677 + CA265_RS02465 0.40 +0.6 608,678 - CA265_RS02465 0.40 -1.1 608,678 - CA265_RS02465 0.40 +0.8 608,682 - CA265_RS02465 0.40 -0.4 608,726 + CA265_RS02465 0.43 -0.4 608,727 - CA265_RS02465 0.43 -1.8 608,762 - CA265_RS02465 0.46 +0.4 608,765 + CA265_RS02465 0.46 -0.0 608,783 + CA265_RS02465 0.47 +1.3 608,856 - CA265_RS02465 0.52 -1.2 608,890 - CA265_RS02465 0.54 -0.4 608,890 - CA265_RS02465 0.54 +0.5 608,890 - CA265_RS02465 0.54 -0.3 608,912 + CA265_RS02465 0.56 +0.7 608,997 - CA265_RS02465 0.62 +0.0 609,024 + CA265_RS02465 0.63 -0.9 609,024 + CA265_RS02465 0.63 +0.3 609,037 - CA265_RS02465 0.64 -0.2 609,082 + CA265_RS02465 0.67 +0.2 609,128 + CA265_RS02465 0.70 -0.0 609,154 - CA265_RS02465 0.72 +0.9 609,369 - CA265_RS02465 0.86 -1.1 609,375 + CA265_RS02465 0.87 -1.1 609,376 - CA265_RS02465 0.87 -0.2 609,384 + CA265_RS02465 0.87 +0.4 609,419 + CA265_RS02465 0.90 +1.9 609,423 - +0.5 609,464 - -0.0 609,544 + -0.2 609,550 - +0.6 609,553 + +0.3 609,585 + -1.1 609,586 - +0.2 609,588 - +1.5 609,624 + -1.6 609,636 + +0.9 609,649 + +0.2 609,677 - +0.4 609,677 - +0.0 609,682 - +1.4 609,682 - -0.1 609,684 - +0.5 609,684 - -0.7 609,695 + +0.3 609,696 - +0.1 609,696 - -0.4 609,696 - -0.2 609,788 + CA265_RS02470 0.13 +0.3 609,844 + CA265_RS02470 0.16 -0.4 609,856 + +0.5 609,856 + CA265_RS02470 0.17 -0.7 609,857 - CA265_RS02470 0.17 -1.0 610,003 - CA265_RS02470 0.27 -0.8 610,012 - CA265_RS02470 0.28 +0.9 610,015 - CA265_RS02470 0.28 -0.2 610,055 + CA265_RS02470 0.31 -0.1 610,056 - CA265_RS02470 0.31 -2.2 610,057 + CA265_RS02470 0.31 -0.4 610,058 - CA265_RS02470 0.31 -0.3 610,076 + CA265_RS02470 0.32 +1.1 610,077 - CA265_RS02470 0.32 -0.2 610,136 + CA265_RS02470 0.36 +1.1 610,138 + CA265_RS02470 0.36 -0.0 610,170 + CA265_RS02470 0.38 +0.6 610,185 - CA265_RS02470 0.39 -0.3 610,206 - CA265_RS02470 0.41 -0.3 610,245 + CA265_RS02470 0.43 +0.4 610,369 + CA265_RS02470 0.51 -0.5 610,373 + CA265_RS02470 0.52 +0.0 610,373 + CA265_RS02470 0.52 +0.2 610,373 + CA265_RS02470 0.52 -0.9 610,374 - CA265_RS02470 0.52 +1.2 610,374 - CA265_RS02470 0.52 -0.1 610,374 - CA265_RS02470 0.52 -1.0 610,463 + CA265_RS02470 0.58 +0.6 610,514 + CA265_RS02470 0.61 +1.0 610,534 + CA265_RS02470 0.62 +0.4 610,545 + CA265_RS02470 0.63 +0.6 610,557 - CA265_RS02470 0.64 +0.5 610,557 - CA265_RS02470 0.64 +0.2
Or see this region's nucleotide sequence