Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS13435

Experiment: rhizosphere sample 4; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 4; outgrowth in LB
2,843,604	+		ABZR87_RS13425	0.61	+0.9
2,843,604	+		ABZR87_RS13425	0.61	+1.2
2,843,605	-		ABZR87_RS13425	0.61	-0.6
2,843,605	-		ABZR87_RS13425	0.61	+0.2
2,843,610	+		ABZR87_RS13425	0.62	-0.2
2,843,610	+		ABZR87_RS13425	0.62	+1.0
2,843,610	+		ABZR87_RS13425	0.62	-1.2
2,843,611	-		ABZR87_RS13425	0.62	+0.3
2,843,611	-		ABZR87_RS13425	0.62	-0.8
2,843,649	+		ABZR87_RS13425	0.68	+1.2
2,843,650	-		ABZR87_RS13425	0.68	-0.2
2,843,650	-		ABZR87_RS13425	0.68	+0.5
2,843,703	+		ABZR87_RS13425	0.75	-1.0
2,843,703	+		ABZR87_RS13425	0.75	-1.0
2,843,704	-		ABZR87_RS13425	0.75	+0.1
2,843,704	-		ABZR87_RS13425	0.75	+0.1
2,843,704	-		ABZR87_RS13425	0.75	-1.8
2,843,722	+		ABZR87_RS13425	0.78	+0.1
2,843,722	+		ABZR87_RS13425	0.78	-0.2
2,843,722	+		ABZR87_RS13425	0.78	-1.7
2,843,722	+		ABZR87_RS13425	0.78	-1.7
2,843,723	-		ABZR87_RS13425	0.78	-1.0
2,843,723	-		ABZR87_RS13425	0.78	-1.0
2,843,725	+		ABZR87_RS13425	0.78	+0.9
2,843,725	+		ABZR87_RS13425	0.78	-0.5
2,843,725	+		ABZR87_RS13425	0.78	-1.1
2,843,725	+		ABZR87_RS13425	0.78	+0.3
2,843,905	+				-0.5
2,843,905	+				+0.3
2,843,906	-				-0.1
2,843,906	-				+1.2
2,843,982	+		ABZR87_RS13430	0.20	-1.0
2,843,983	-		ABZR87_RS13430	0.20	-0.3
2,843,983	-		ABZR87_RS13430	0.20	-0.2
2,844,049	-		ABZR87_RS13430	0.35	-0.6
2,844,126	+		ABZR87_RS13430	0.52	-0.0
2,844,127	-		ABZR87_RS13430	0.52	+0.5
2,844,127	-		ABZR87_RS13430	0.52	+0.3
2,844,127	-		ABZR87_RS13430	0.52	-0.8
2,844,202	-		ABZR87_RS13430	0.69	+0.3
2,844,225	+		ABZR87_RS13430	0.75	+0.6
2,844,225	+		ABZR87_RS13430	0.75	-1.8
2,844,225	+		ABZR87_RS13430	0.75	+0.5
2,844,225	+		ABZR87_RS13430	0.75	-0.0
2,844,225	+		ABZR87_RS13430	0.75	-0.4
2,844,226	-		ABZR87_RS13430	0.75	-0.5
2,844,231	+		ABZR87_RS13430	0.76	+0.1
2,844,231	+		ABZR87_RS13430	0.76	+1.7
2,844,231	+		ABZR87_RS13430	0.76	+0.1
2,844,231	+		ABZR87_RS13430	0.76	+0.5
2,844,231	+		ABZR87_RS13430	0.76	+0.0
2,844,232	-		ABZR87_RS13430	0.76	+0.2
2,844,232	-		ABZR87_RS13430	0.76	-0.6
2,844,232	-		ABZR87_RS13430	0.76	+0.2
2,844,234	+		ABZR87_RS13430	0.77	-1.6
2,844,234	+		ABZR87_RS13430	0.77	+0.1
2,844,235	-		ABZR87_RS13430	0.77	-0.1
2,844,235	-		ABZR87_RS13430	0.77	+2.2
2,844,259	-		ABZR87_RS13430	0.82	+1.5
2,844,374	+				+1.5
2,844,375	-				+1.2
2,844,517	+		ABZR87_RS13435	0.13	-0.5
2,844,518	-		ABZR87_RS13435	0.13	+1.0
2,844,518	-		ABZR87_RS13435	0.13	-0.7
2,844,518	-		ABZR87_RS13435	0.13	-0.0
2,844,518	-		ABZR87_RS13435	0.13	+0.2
2,844,518	-		ABZR87_RS13435	0.13	-0.3
2,844,921	+		ABZR87_RS13435	0.57	-1.0
2,844,921	+		ABZR87_RS13435	0.57	-0.8
2,844,921	+		ABZR87_RS13435	0.57	-0.6
2,844,921	+		ABZR87_RS13435	0.57	-1.0
2,844,921	+		ABZR87_RS13435	0.57	-0.2
2,844,921	+		ABZR87_RS13435	0.57	+0.0
2,844,921	+		ABZR87_RS13435	0.57	-0.4
2,844,922	-		ABZR87_RS13435	0.57	-1.4
2,844,922	-		ABZR87_RS13435	0.57	-0.0
2,844,922	-		ABZR87_RS13435	0.57	+0.3
2,844,922	-		ABZR87_RS13435	0.57	+1.1
2,844,922	-		ABZR87_RS13435	0.57	-2.2
2,844,922	-		ABZR87_RS13435	0.57	+0.1
2,844,922	-		ABZR87_RS13435	0.57	+0.6
2,844,922	-		ABZR87_RS13435	0.57	-0.6
2,844,922	-		ABZR87_RS13435	0.57	-0.3
2,844,925	+		ABZR87_RS13435	0.58	+0.9
2,844,925	+		ABZR87_RS13435	0.58	+0.5
2,844,925	+		ABZR87_RS13435	0.58	+0.8
2,844,925	+		ABZR87_RS13435	0.58	-0.2
2,844,925	+		ABZR87_RS13435	0.58	+0.4
2,844,925	+		ABZR87_RS13435	0.58	+0.5
2,844,925	+		ABZR87_RS13435	0.58	-0.0
2,844,926	-		ABZR87_RS13435	0.58	+0.0
2,844,926	-		ABZR87_RS13435	0.58	-0.6
2,844,926	-		ABZR87_RS13435	0.58	-0.3
2,844,926	-		ABZR87_RS13435	0.58	-1.4
2,844,926	-		ABZR87_RS13435	0.58	-1.2
2,844,926	-		ABZR87_RS13435	0.58	-0.2
2,844,926	-		ABZR87_RS13435	0.58	-1.9
2,844,926	-		ABZR87_RS13435	0.58	-0.2
2,844,926	-		ABZR87_RS13435	0.58	+0.1
2,844,926	-		ABZR87_RS13435	0.58	+0.2
2,845,018	+		ABZR87_RS13435	0.68	+0.6
2,845,201	+		ABZR87_RS13435	0.88	-0.8
2,845,201	+		ABZR87_RS13435	0.88	+0.7
2,845,214	+		ABZR87_RS13435	0.89	+0.5
2,845,214	+		ABZR87_RS13435	0.89	+0.4
2,845,421	-		ABZR87_RS13440	0.11	-0.5
2,845,421	-		ABZR87_RS13440	0.11	-0.1
2,845,429	+		ABZR87_RS13440	0.12	-0.0
2,845,429	+		ABZR87_RS13440	0.12	-1.6
2,845,430	-		ABZR87_RS13440	0.12	-0.9
2,845,584	+		ABZR87_RS13440	0.27	-0.4
2,845,584	+		ABZR87_RS13440	0.27	+1.3
2,845,584	+		ABZR87_RS13440	0.27	-0.3
2,845,585	-		ABZR87_RS13440	0.27	-0.4
2,845,585	-		ABZR87_RS13440	0.27	-0.2
2,845,585	-		ABZR87_RS13440	0.27	-0.9
2,845,650	+		ABZR87_RS13440	0.34	+0.6
2,845,651	-		ABZR87_RS13440	0.34	-0.2
2,845,651	-		ABZR87_RS13440	0.34	-0.2
2,845,651	-		ABZR87_RS13440	0.34	-0.1
2,845,717	-		ABZR87_RS13440	0.40	-0.8
2,845,717	-		ABZR87_RS13440	0.40	-0.3
2,845,717	-		ABZR87_RS13440	0.40	-0.6
2,845,889	+		ABZR87_RS13440	0.57	+0.2
2,845,890	-		ABZR87_RS13440	0.58	+0.6
2,845,917	+		ABZR87_RS13440	0.60	+2.5
2,845,917	+		ABZR87_RS13440	0.60	+0.4
2,845,918	-		ABZR87_RS13440	0.60	-0.3
2,846,097	+		ABZR87_RS13440	0.78	-0.2
2,846,097	+		ABZR87_RS13440	0.78	+0.4
2,846,098	-		ABZR87_RS13440	0.78	+1.2
2,846,098	-		ABZR87_RS13440	0.78	+1.6
2,846,202	+		ABZR87_RS13440	0.88	-1.5
2,846,202	+		ABZR87_RS13440	0.88	-0.4
2,846,202	+		ABZR87_RS13440	0.88	-1.1
2,846,203	-		ABZR87_RS13440	0.89	-0.1
2,846,203	-		ABZR87_RS13440	0.89	-1.8
2,846,203	-		ABZR87_RS13440	0.89	+0.6
2,846,203	-		ABZR87_RS13440	0.89	-0.3
2,846,243	+				-0.3
2,846,243	+				+1.2
2,846,244	-				+0.3
2,846,244	-				-0.8
2,846,259	+				-2.7
2,846,259	+				+0.8
2,846,260	-				-0.1
2,846,260	-				+0.1
2,846,278	+				+0.6