Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS05280

Experiment: rhizosphere sample 4; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 4; outgrowth in LB
1,108,637	+				+1.6
1,108,637	+				+1.9
1,108,637	+				+0.2
1,108,638	-				+0.4
1,108,638	-				-0.4
1,108,638	-				+1.4
1,108,638	-				+1.2
1,108,651	+				+1.9
1,108,651	+				+1.5
1,108,651	+				+1.5
1,108,652	-				-0.3
1,108,652	-				-1.1
1,108,652	-				+0.5
1,108,652	-				-0.1
1,108,662	+				+0.7
1,108,663	-				-1.1
1,108,663	-				+0.1
1,108,728	+				+1.0
1,108,728	+				+1.7
1,108,728	+				+0.8
1,108,728	+				+0.4
1,108,728	+				+0.7
1,108,728	+				-0.3
1,108,728	+				-0.2
1,108,728	+				+0.6
1,108,728	+				+1.8
1,108,728	+				+1.0
1,108,728	+				-0.1
1,108,729	-				+3.2
1,108,729	-				+0.3
1,108,729	-				+0.5
1,108,729	-				+0.8
1,108,729	-				-1.5
1,108,729	-				+0.2
1,108,729	-				-1.3
1,108,729	-				-0.0
1,108,729	-				-2.1
1,108,729	-				+1.0
1,108,729	-				-2.9
1,108,729	-				-0.0
1,108,729	-				+0.5
1,108,729	-				+0.1
1,108,729	-				-0.1
1,108,729	-				+0.1
1,109,000	+				+0.2
1,109,000	+				-0.0
1,109,000	+				+0.3
1,109,000	+				+3.1
1,109,000	+				+0.8
1,109,000	+				+1.2
1,109,000	+				+1.2
1,109,000	+				+0.9
1,109,000	+				+0.6
1,109,000	+				+1.1
1,109,000	+				+0.8
1,109,000	+				+0.6
1,109,001	-				+1.6
1,109,001	-				+0.5
1,109,001	-				-0.7
1,109,001	-				+0.6
1,109,025	+				+1.9
1,109,025	+				-0.4
1,109,025	+				+2.0
1,109,025	+				-0.2
1,109,025	+				+0.1
1,109,025	+				+0.7
1,109,026	-				+2.0
1,109,026	-				+3.0
1,109,026	-				-1.4
1,109,055	+				-0.4
1,109,055	+				-0.8
1,109,055	+				-0.1
1,109,056	-				+0.4
1,109,056	-				-0.7
1,109,056	-				+0.5
1,109,056	-				+0.4
1,109,108	+				+1.0
1,109,109	-				+0.3
1,109,109	-				+1.6
1,109,109	-				+0.5
1,109,109	-				-0.3
1,109,109	-				+1.8
1,109,110	+				-0.2
1,109,110	+				+1.2
1,109,110	+				+1.1
1,109,110	+				+0.1
1,109,110	+				+1.4
1,109,110	+				+0.5
1,109,110	+				+0.3
1,109,110	+				+0.0
1,109,110	+				+1.4
1,109,111	-				-1.2
1,109,111	-				-0.6
1,109,111	-				+0.2
1,109,111	-				+1.0
1,109,111	-				+0.0
1,109,111	-				+0.2
1,109,111	-				-0.6
1,109,111	-				-1.1
1,109,173	-				-0.3
1,109,209	+				+0.4
1,109,210	-				-0.2
1,109,210	-				+0.1
1,109,210	-				-0.5
1,109,210	-				-0.2
1,109,210	-				-1.8
1,109,210	-				-0.5
1,109,215	+				+1.6
1,109,215	+				+0.9
1,109,215	+				+1.2
1,109,215	+				+0.5
1,109,215	+				-1.1
1,109,215	+				-0.0
1,109,215	+				-0.0
1,109,216	-				+0.8
1,109,216	-				-1.4
1,109,216	-				-0.8
1,109,216	-				+1.1
1,109,216	-				-1.3
1,109,216	-				-0.7
1,109,216	-				-0.5
1,109,270	-				-0.2
1,109,270	-				+0.2
1,109,273	+				+0.7
1,109,273	+				+0.1
1,109,274	-				-0.6
1,109,274	-				-0.3
1,109,274	-				+0.6
1,109,274	-				-1.0
1,109,274	-				-1.1
1,109,274	-				-0.4
1,109,274	-				+1.9
1,109,274	-				+2.6
1,109,284	+				+0.9
1,109,285	-				+0.2
1,109,285	-				-0.0
1,109,285	-				-0.1
1,109,300	+				-0.4
1,109,301	-				-0.1
1,109,301	-				+1.6
1,109,303	-				-0.0
1,109,327	+				-0.1
1,109,335	-				+1.6
1,109,415	+				+0.6
1,109,692	-		ABZR87_RS05280	0.10	+0.7
1,109,904	+		ABZR87_RS05280	0.21	-0.4
1,109,904	+		ABZR87_RS05280	0.21	-0.0
1,109,904	+		ABZR87_RS05280	0.21	+0.6
1,109,905	-		ABZR87_RS05280	0.21	-0.3
1,109,905	-		ABZR87_RS05280	0.21	+0.5
1,109,919	+		ABZR87_RS05280	0.22	+0.2
1,109,920	-		ABZR87_RS05280	0.22	+0.2
1,109,920	-		ABZR87_RS05280	0.22	+0.4
1,109,920	-		ABZR87_RS05280	0.22	-0.3
1,110,018	+		ABZR87_RS05280	0.28	+0.3
1,110,018	+		ABZR87_RS05280	0.28	+2.0
1,110,018	+		ABZR87_RS05280	0.28	-1.0
1,110,018	+		ABZR87_RS05280	0.28	+0.1
1,110,018	+		ABZR87_RS05280	0.28	-0.8
1,110,018	+		ABZR87_RS05280	0.28	-0.6
1,110,018	+		ABZR87_RS05280	0.28	-1.4
1,110,018	+		ABZR87_RS05280	0.28	+1.1
1,110,018	+		ABZR87_RS05280	0.28	+0.9
1,110,018	+		ABZR87_RS05280	0.28	+1.5
1,110,018	+		ABZR87_RS05280	0.28	+0.1
1,110,018	+		ABZR87_RS05280	0.28	+0.8
1,110,018	+		ABZR87_RS05280	0.28	+0.1
1,110,018	+		ABZR87_RS05280	0.28	+0.9
1,110,018	+		ABZR87_RS05280	0.28	+0.4
1,110,018	+		ABZR87_RS05280	0.28	+0.8
1,110,018	+		ABZR87_RS05280	0.28	-0.8
1,110,018	+		ABZR87_RS05280	0.28	+0.8
1,110,018	+		ABZR87_RS05280	0.28	-1.5
1,110,018	+		ABZR87_RS05280	0.28	-0.8
1,110,018	+		ABZR87_RS05280	0.28	-1.2
1,110,019	-		ABZR87_RS05280	0.28	-0.7
1,110,019	-		ABZR87_RS05280	0.28	-0.5
1,110,019	-		ABZR87_RS05280	0.28	+0.0
1,110,019	-		ABZR87_RS05280	0.28	-0.4
1,110,019	-		ABZR87_RS05280	0.28	-0.3
1,110,019	-		ABZR87_RS05280	0.28	-0.6
1,110,019	-		ABZR87_RS05280	0.28	+0.6
1,110,019	-		ABZR87_RS05280	0.28	-0.1
1,110,019	-		ABZR87_RS05280	0.28	-0.1
1,110,019	-		ABZR87_RS05280	0.28	+0.4
1,110,019	-		ABZR87_RS05280	0.28	+0.2
1,110,019	-		ABZR87_RS05280	0.28	+0.5
1,110,019	-		ABZR87_RS05280	0.28	-0.0
1,110,019	-		ABZR87_RS05280	0.28	-0.1
1,110,019	-		ABZR87_RS05280	0.28	-1.4
1,110,019	-		ABZR87_RS05280	0.28	+2.0
1,110,019	-		ABZR87_RS05280	0.28	+0.6
1,110,019	-		ABZR87_RS05280	0.28	-1.2
1,110,019	-		ABZR87_RS05280	0.28	+0.4
1,110,019	-		ABZR87_RS05280	0.28	+0.6
1,110,019	-		ABZR87_RS05280	0.28	-0.0
1,110,019	-		ABZR87_RS05280	0.28	-0.7
1,110,019	-		ABZR87_RS05280	0.28	-0.3
1,110,019	-		ABZR87_RS05280	0.28	+0.3
1,110,019	-		ABZR87_RS05280	0.28	-0.2
1,110,019	-		ABZR87_RS05280	0.28	+0.0
1,110,104	+		ABZR87_RS05280	0.32	+2.5
1,110,284	+		ABZR87_RS05280	0.42	+1.1
1,110,284	+		ABZR87_RS05280	0.42	+0.2
1,110,284	+		ABZR87_RS05280	0.42	+0.9
1,110,284	+		ABZR87_RS05280	0.42	+0.5
1,110,284	+		ABZR87_RS05280	0.42	-0.5
1,110,284	+		ABZR87_RS05280	0.42	+0.3
1,110,284	+		ABZR87_RS05280	0.42	-0.7
1,110,284	+		ABZR87_RS05280	0.42	-0.1
1,110,284	+		ABZR87_RS05280	0.42	-0.7
1,110,284	+		ABZR87_RS05280	0.42	-0.0
1,110,284	+		ABZR87_RS05280	0.42	+0.8
1,110,284	+		ABZR87_RS05280	0.42	+0.7
1,110,285	-		ABZR87_RS05280	0.42	+0.2
1,110,285	-		ABZR87_RS05280	0.42	-0.3
1,110,285	-		ABZR87_RS05280	0.42	-2.7
1,110,285	-		ABZR87_RS05280	0.42	-0.3
1,110,285	-		ABZR87_RS05280	0.42	+1.6
1,110,285	-		ABZR87_RS05280	0.42	-0.9
1,110,285	-		ABZR87_RS05280	0.42	-0.8
1,110,285	-		ABZR87_RS05280	0.42	-0.7
1,110,285	-		ABZR87_RS05280	0.42	+0.1
1,110,285	-		ABZR87_RS05280	0.42	-1.2
1,110,285	-		ABZR87_RS05280	0.42	+0.5
1,110,285	-		ABZR87_RS05280	0.42	+0.4
1,110,285	-		ABZR87_RS05280	0.42	-0.1
1,110,285	-		ABZR87_RS05280	0.42	-0.7
1,110,285	-		ABZR87_RS05280	0.42	+0.1
1,110,285	-		ABZR87_RS05280	0.42	-0.2
1,110,394	-		ABZR87_RS05280	0.48	-1.6
1,110,417	+		ABZR87_RS05280	0.49	-0.1
1,110,418	-		ABZR87_RS05280	0.49	-0.3
1,110,418	-		ABZR87_RS05280	0.49	+0.3
1,110,418	-		ABZR87_RS05280	0.49	+0.9
1,110,418	-		ABZR87_RS05280	0.49	-0.2
1,110,418	-		ABZR87_RS05280	0.49	-0.3
1,110,418	-		ABZR87_RS05280	0.49	-0.4
1,110,418	-		ABZR87_RS05280	0.49	-0.9
1,110,418	-		ABZR87_RS05280	0.49	-1.2
1,110,573	+		ABZR87_RS05280	0.57	+2.1
1,110,573	+		ABZR87_RS05280	0.57	-0.8
1,110,573	+		ABZR87_RS05280	0.57	-0.1
1,110,573	+		ABZR87_RS05280	0.57	+0.9
1,110,573	+		ABZR87_RS05280	0.57	+0.3
1,110,573	+		ABZR87_RS05280	0.57	+1.3
1,110,573	+		ABZR87_RS05280	0.57	+0.8
1,110,574	-		ABZR87_RS05280	0.57	+0.8
1,110,574	-		ABZR87_RS05280	0.57	-0.3
1,110,574	-		ABZR87_RS05280	0.57	+0.0
1,110,574	-		ABZR87_RS05280	0.57	-1.0
1,110,574	-		ABZR87_RS05280	0.57	+0.8
1,110,574	-		ABZR87_RS05280	0.57	-0.9
1,110,574	-		ABZR87_RS05280	0.57	+0.9
1,110,574	-		ABZR87_RS05280	0.57	-0.8
1,110,574	-		ABZR87_RS05280	0.57	-0.0
1,110,574	-		ABZR87_RS05280	0.57	-0.7
1,110,574	-		ABZR87_RS05280	0.57	+0.1
1,110,574	-		ABZR87_RS05280	0.57	+0.9
1,110,574	-		ABZR87_RS05280	0.57	-1.0
1,110,574	-		ABZR87_RS05280	0.57	+0.3
1,110,753	+		ABZR87_RS05280	0.67	+0.8
1,110,753	+		ABZR87_RS05280	0.67	-0.0
1,110,753	+		ABZR87_RS05280	0.67	+0.7
1,110,753	+		ABZR87_RS05280	0.67	+1.0
1,110,753	+		ABZR87_RS05280	0.67	+1.3
1,110,753	+		ABZR87_RS05280	0.67	-0.9
1,110,753	+		ABZR87_RS05280	0.67	+1.1
1,110,753	+		ABZR87_RS05280	0.67	+0.0
1,110,753	+		ABZR87_RS05280	0.67	-0.1
1,110,753	+		ABZR87_RS05280	0.67	+0.5
1,110,753	+		ABZR87_RS05280	0.67	+0.6
1,110,753	+		ABZR87_RS05280	0.67	-0.1
1,110,753	+		ABZR87_RS05280	0.67	-0.2
1,110,753	+		ABZR87_RS05280	0.67	-1.3
1,110,753	+		ABZR87_RS05280	0.67	-0.2
1,110,753	+		ABZR87_RS05280	0.67	-0.3
1,110,753	+		ABZR87_RS05280	0.67	+0.5
1,110,754	-		ABZR87_RS05280	0.67	+0.0
1,110,754	-		ABZR87_RS05280	0.67	-0.4
1,110,754	-		ABZR87_RS05280	0.67	+1.2
1,110,754	-		ABZR87_RS05280	0.67	-1.3
1,110,754	-		ABZR87_RS05280	0.67	+0.6
1,110,754	-		ABZR87_RS05280	0.67	-1.1
1,110,754	-		ABZR87_RS05280	0.67	+0.4
1,110,754	-		ABZR87_RS05280	0.67	+0.2
1,110,754	-		ABZR87_RS05280	0.67	+0.9
1,110,754	-		ABZR87_RS05280	0.67	-0.9
1,110,754	-		ABZR87_RS05280	0.67	+0.0
1,110,754	-		ABZR87_RS05280	0.67	-1.1
1,110,754	-		ABZR87_RS05280	0.67	-0.2
1,110,754	-		ABZR87_RS05280	0.67	-0.5
1,110,754	-		ABZR87_RS05280	0.67	-0.2
1,110,754	-		ABZR87_RS05280	0.67	+0.1
1,110,861	+		ABZR87_RS05280	0.73	+0.4
1,110,861	+		ABZR87_RS05280	0.73	+0.3
1,110,861	+		ABZR87_RS05280	0.73	+0.5
1,110,862	-		ABZR87_RS05280	0.73	-0.4
1,110,862	-		ABZR87_RS05280	0.73	-0.2
1,110,862	-		ABZR87_RS05280	0.73	-0.7
1,110,862	-		ABZR87_RS05280	0.73	-0.3
1,110,909	+		ABZR87_RS05280	0.75	+0.7
1,110,909	+		ABZR87_RS05280	0.75	+0.2
1,110,909	+		ABZR87_RS05280	0.75	+0.6
1,110,909	+		ABZR87_RS05280	0.75	+0.7
1,110,909	+		ABZR87_RS05280	0.75	-0.1
1,110,910	-		ABZR87_RS05280	0.75	+0.2
1,110,910	-		ABZR87_RS05280	0.75	-0.4
1,110,910	-		ABZR87_RS05280	0.75	-0.8
1,110,910	-		ABZR87_RS05280	0.75	-0.1
1,110,910	-		ABZR87_RS05280	0.75	+0.3
1,110,984	+		ABZR87_RS05280	0.79	+0.8
1,110,984	+		ABZR87_RS05280	0.79	-1.7
1,110,984	+		ABZR87_RS05280	0.79	-0.5
1,110,984	+		ABZR87_RS05280	0.79	+0.6
1,110,984	+		ABZR87_RS05280	0.79	+0.7
1,110,985	-		ABZR87_RS05280	0.79	-2.0
1,110,985	-		ABZR87_RS05280	0.79	+0.3
1,110,985	-		ABZR87_RS05280	0.79	-0.1
1,110,985	-		ABZR87_RS05280	0.79	-1.0
1,110,985	-		ABZR87_RS05280	0.79	+0.1
1,110,985	-		ABZR87_RS05280	0.79	-0.1
1,111,152	+		ABZR87_RS05280	0.88	+0.3
1,111,152	+		ABZR87_RS05280	0.88	-0.0
1,111,152	+		ABZR87_RS05280	0.88	-0.2
1,111,152	+		ABZR87_RS05280	0.88	-0.5
1,111,152	+		ABZR87_RS05280	0.88	+0.8
1,111,152	+		ABZR87_RS05280	0.88	-0.8
1,111,153	-		ABZR87_RS05280	0.88	+1.1
1,111,153	-		ABZR87_RS05280	0.88	-0.3
1,111,153	-		ABZR87_RS05280	0.88	-0.5
1,111,227	+				+1.1
1,111,227	+				+0.2
1,111,227	+				+0.5
1,111,227	+				-0.2
1,111,227	+				+0.3
1,111,228	-				+0.1
1,111,228	-				+0.3
1,111,228	-				-0.8
1,111,228	-				-0.7
1,111,228	-				-1.8
1,111,228	-				+1.5
1,111,323	+				+0.8
1,111,323	+				+0.9
1,111,323	+				+0.1
1,111,324	-				+0.4
1,111,324	-				+0.8
1,111,324	-				-2.3
1,111,324	-				-0.4
1,111,324	-				+0.6
1,111,401	-				-1.0
1,111,525	+				-0.7
1,111,525	+				-1.3
1,111,526	-				-1.5
1,111,550	+				+0.0
1,111,550	+				-0.2
1,111,550	+				-0.5
1,111,550	+				+0.0
1,111,551	-				-1.4
1,111,551	-				-0.9
1,111,638	+				-0.2
1,111,638	+				-1.5
1,111,638	+				+0.3
1,111,638	+				-0.1
1,111,638	+				+1.0
1,111,638	+				+1.0
1,111,638	+				+1.1
1,111,639	-				-1.9
1,111,639	-				-0.8
1,111,639	-				-0.7
1,111,639	-				-0.7
1,111,639	-				-2.0
1,111,639	-				-2.0
1,111,639	-				-2.8
1,111,741	+				+0.6
1,111,741	+				-2.6
1,111,741	+				+0.1
1,111,741	+				-1.0
1,111,741	+				-0.7
1,111,742	-				-1.2
1,111,742	-				-0.1
1,111,742	-				+0.5
1,111,742	-				-1.3
1,111,742	-				-2.5
1,111,823	+				-1.4
1,111,823	+				-0.6
1,111,824	-				-2.1
1,112,034	+		ABZR87_RS05285	0.23	+1.0
1,112,056	+		ABZR87_RS05285	0.25	-1.1
1,112,057	-		ABZR87_RS05285	0.25	-0.7
1,112,167	+		ABZR87_RS05285	0.36	-0.1
1,112,167	+		ABZR87_RS05285	0.36	+0.1
1,112,177	+		ABZR87_RS05285	0.37	-2.0
1,112,177	+		ABZR87_RS05285	0.37	-0.4
1,112,177	+		ABZR87_RS05285	0.37	-0.2
1,112,177	+		ABZR87_RS05285	0.37	-0.1
1,112,177	+		ABZR87_RS05285	0.37	-0.6
1,112,177	+		ABZR87_RS05285	0.37	-0.3
1,112,177	+		ABZR87_RS05285	0.37	+0.5
1,112,178	-		ABZR87_RS05285	0.37	-0.7
1,112,178	-		ABZR87_RS05285	0.37	-0.3
1,112,178	-		ABZR87_RS05285	0.37	-1.5
1,112,178	-		ABZR87_RS05285	0.37	+0.1
1,112,178	-		ABZR87_RS05285	0.37	+0.0
1,112,178	-		ABZR87_RS05285	0.37	-0.3
1,112,178	-		ABZR87_RS05285	0.37	-0.2
1,112,324	+		ABZR87_RS05285	0.51	-0.3