Strain Fitness in Ralstonia sp. UNC404CL21Col around ABZR87_RS16770

Experiment: rhizosphere sample 3; outgrowth in LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	rhizosphere sample 3; outgrowth in LB
112,524	+				-0.5
112,524	+				+0.3
112,524	+				+0.3
112,524	+				+1.7
112,524	+				+1.4
112,524	+				-0.5
112,525	-				+2.0
112,525	-				+2.5
112,594	-				+0.1
112,692	+		ABZR87_RS16765	0.18	+0.5
112,692	+		ABZR87_RS16765	0.18	-2.4
112,692	+		ABZR87_RS16765	0.18	-0.5
112,692	+		ABZR87_RS16765	0.18	-0.8
112,693	-		ABZR87_RS16765	0.18	-1.8
112,722	+		ABZR87_RS16765	0.23	-1.7
112,795	+		ABZR87_RS16765	0.36	-1.1
112,795	+		ABZR87_RS16765	0.36	-1.6
112,795	+		ABZR87_RS16765	0.36	+0.7
112,795	+		ABZR87_RS16765	0.36	+1.0
112,795	+		ABZR87_RS16765	0.36	+1.1
112,796	-		ABZR87_RS16765	0.36	+1.0
112,796	-		ABZR87_RS16765	0.36	-0.8
112,796	-		ABZR87_RS16765	0.36	+0.6
112,796	-		ABZR87_RS16765	0.36	+0.5
112,796	-		ABZR87_RS16765	0.36	+0.9
112,840	-		ABZR87_RS16765	0.44	-0.5
113,007	+		ABZR87_RS16765	0.73	-2.1
113,007	+		ABZR87_RS16765	0.73	+0.4
113,007	+		ABZR87_RS16765	0.73	-1.0
113,008	-		ABZR87_RS16765	0.73	-1.4
113,109	+				+1.0
113,110	-				+4.0
113,110	-				-2.6
113,110	-				-0.8
113,110	-				+1.3
113,161	+				-0.4
113,161	+				-1.2
113,161	+				+1.2
113,161	+				+0.3
113,162	-				-0.4
113,168	-				-0.6
113,168	-				+0.5
113,199	+				+0.4
113,200	-				+1.0
113,200	-				+0.2
113,200	-				+1.4
113,321	+				-0.5
113,321	+				+0.5
113,322	-				-1.0
113,342	+				-1.3
113,342	+				-1.1
113,343	-				-0.4
113,343	-				-1.7
113,345	+				-1.3
113,346	-				-1.1
113,428	+				+0.9
113,428	+				+0.0
113,429	-				+1.0
113,429	-				-1.4
113,647	+				-1.0
113,647	+				-0.2
113,648	-				-0.8
113,648	-				-0.6
113,688	+		ABZR87_RS16770	0.11	-0.6
113,688	+		ABZR87_RS16770	0.11	+0.1
113,688	+		ABZR87_RS16770	0.11	+1.7
113,688	+		ABZR87_RS16770	0.11	+0.0
113,688	+		ABZR87_RS16770	0.11	+0.9
113,688	+		ABZR87_RS16770	0.11	+0.1
113,688	+		ABZR87_RS16770	0.11	+1.3
113,688	+		ABZR87_RS16770	0.11	-2.1
113,688	+		ABZR87_RS16770	0.11	+0.5
113,689	-		ABZR87_RS16770	0.11	+0.7
113,689	-		ABZR87_RS16770	0.11	-0.1
113,689	-		ABZR87_RS16770	0.11	-1.7
113,689	-		ABZR87_RS16770	0.11	-0.7
113,689	-		ABZR87_RS16770	0.11	-0.3
113,689	-		ABZR87_RS16770	0.11	+0.4
113,689	-		ABZR87_RS16770	0.11	-1.3
113,689	-		ABZR87_RS16770	0.11	+3.3
113,689	-		ABZR87_RS16770	0.11	-0.8
113,689	-		ABZR87_RS16770	0.11	+0.4
113,689	-		ABZR87_RS16770	0.11	+1.0
113,689	-		ABZR87_RS16770	0.11	-0.5
113,718	+		ABZR87_RS16770	0.12	-1.7
113,719	-		ABZR87_RS16770	0.12	+1.2
113,719	-		ABZR87_RS16770	0.12	+1.6
113,719	-		ABZR87_RS16770	0.12	-1.2
113,781	+		ABZR87_RS16770	0.14	+0.3
113,781	+		ABZR87_RS16770	0.14	-1.2
113,781	+		ABZR87_RS16770	0.14	-0.6
113,781	+		ABZR87_RS16770	0.14	+1.7
113,781	+		ABZR87_RS16770	0.14	-1.0
113,781	+		ABZR87_RS16770	0.14	-0.7
113,781	+		ABZR87_RS16770	0.14	-0.3
113,781	+		ABZR87_RS16770	0.14	+0.2
113,781	+		ABZR87_RS16770	0.14	+1.0
113,781	+		ABZR87_RS16770	0.14	-0.3
113,782	-		ABZR87_RS16770	0.14	-0.7
113,782	-		ABZR87_RS16770	0.14	-0.9
113,919	+		ABZR87_RS16770	0.19	+0.8
113,919	+		ABZR87_RS16770	0.19	+1.4
113,919	+		ABZR87_RS16770	0.19	+0.2
113,919	+		ABZR87_RS16770	0.19	-0.7
113,919	+		ABZR87_RS16770	0.19	-1.1
113,919	+		ABZR87_RS16770	0.19	+0.8
113,919	+		ABZR87_RS16770	0.19	+0.3
113,920	-		ABZR87_RS16770	0.19	+1.3
113,920	-		ABZR87_RS16770	0.19	-0.0
113,964	+		ABZR87_RS16770	0.20	+1.5
113,964	+		ABZR87_RS16770	0.20	+0.3
113,964	+		ABZR87_RS16770	0.20	-0.5
113,964	+		ABZR87_RS16770	0.20	+1.5
113,964	+		ABZR87_RS16770	0.20	-0.7
113,965	-		ABZR87_RS16770	0.20	-0.6
113,965	-		ABZR87_RS16770	0.20	-1.0
113,965	-		ABZR87_RS16770	0.20	+0.6
114,216	+		ABZR87_RS16770	0.29	-1.4
114,217	-		ABZR87_RS16770	0.29	-1.8
114,217	-		ABZR87_RS16770	0.29	-0.1
114,315	+		ABZR87_RS16770	0.32	-0.6
114,315	+		ABZR87_RS16770	0.32	+1.8
114,316	-		ABZR87_RS16770	0.32	-0.4
114,316	-		ABZR87_RS16770	0.32	+1.3
114,316	-		ABZR87_RS16770	0.32	+2.0
114,316	-		ABZR87_RS16770	0.32	+1.3
114,316	-		ABZR87_RS16770	0.32	-1.0
114,489	-		ABZR87_RS16770	0.38	-0.1
114,489	-		ABZR87_RS16770	0.38	-0.9
114,695	-		ABZR87_RS16770	0.45	+2.0
114,744	+		ABZR87_RS16770	0.47	-0.7
114,745	-		ABZR87_RS16770	0.47	-0.1
114,745	-		ABZR87_RS16770	0.47	+1.2
114,745	-		ABZR87_RS16770	0.47	-0.9
115,257	+		ABZR87_RS16770	0.64	-2.8
115,257	+		ABZR87_RS16770	0.64	-0.9
115,257	+		ABZR87_RS16770	0.64	+0.2
115,257	+		ABZR87_RS16770	0.64	+0.1
115,257	+		ABZR87_RS16770	0.64	+0.0
115,258	-		ABZR87_RS16770	0.64	+1.3
115,347	+		ABZR87_RS16770	0.67	-0.5
115,347	+		ABZR87_RS16770	0.67	-0.9
115,347	+		ABZR87_RS16770	0.67	+1.3
115,347	+		ABZR87_RS16770	0.67	+0.5
115,347	+		ABZR87_RS16770	0.67	+0.3
115,348	-		ABZR87_RS16770	0.67	-0.7
115,420	+		ABZR87_RS16770	0.70	+0.5
115,614	-		ABZR87_RS16770	0.76	+0.1
115,799	+		ABZR87_RS16770	0.83	-0.7
115,799	+		ABZR87_RS16770	0.83	-1.3
115,800	-		ABZR87_RS16770	0.83	-0.5
115,800	-		ABZR87_RS16770	0.83	-1.7
115,815	+		ABZR87_RS16770	0.83	-0.5
115,815	+		ABZR87_RS16770	0.83	-0.7
115,816	-		ABZR87_RS16770	0.83	-0.8
115,816	-		ABZR87_RS16770	0.83	-2.2
116,096	+				-0.5
116,097	+				-1.7
116,097	+				-0.9
116,097	+				+0.3
116,098	-				-0.8
116,098	-				-1.0
116,098	-				+0.6
116,162	+				-0.6
116,163	-				+0.0
116,205	+				-0.6
116,205	+				+1.1
116,205	+				-2.6
116,206	-				-0.4
116,206	-				-0.8
116,206	-				+1.8
116,206	-				-0.9
116,206	-				-1.7
116,206	-				+0.4
116,206	-				+0.1
116,268	+				+0.6
116,268	+				-1.6
116,269	-				+1.7
116,269	-				+1.1
116,323	+				+0.4
116,337	+				-0.6
116,337	+				+1.2
116,337	+				-0.1
116,337	+				+0.9
116,338	-				-1.6
116,338	-				-0.5
116,338	-				-0.9
116,338	-				+2.5
116,339	+				+0.4
116,340	-				+0.9
116,438	+				-0.8
116,438	+				+0.6
116,438	+				-0.0
116,438	+				-1.1
116,439	-				-0.3
116,489	+				-1.1
116,489	+				+0.7
116,489	+				+1.0
116,490	-				+1.3
116,505	-				+0.1
116,798	+		ABZR87_RS16775	0.32	+0.3
116,798	+		ABZR87_RS16775	0.32	+0.3
116,798	+		ABZR87_RS16775	0.32	-0.5
116,798	+		ABZR87_RS16775	0.32	+0.0
116,798	+		ABZR87_RS16775	0.32	-1.1
116,798	+		ABZR87_RS16775	0.32	-0.4
116,799	-		ABZR87_RS16775	0.32	-0.5
116,799	-		ABZR87_RS16775	0.32	-1.5
116,799	-		ABZR87_RS16775	0.32	+1.3
116,799	-		ABZR87_RS16775	0.32	-0.2
116,799	-		ABZR87_RS16775	0.32	-0.8
116,799	-		ABZR87_RS16775	0.32	+0.4
116,799	-		ABZR87_RS16775	0.32	-0.3
116,799	-		ABZR87_RS16775	0.32	-1.1
116,799	-		ABZR87_RS16775	0.32	-0.9
116,799	-		ABZR87_RS16775	0.32	+1.1
116,893	+		ABZR87_RS16775	0.40	-0.4
116,893	+		ABZR87_RS16775	0.40	-1.4
116,893	+		ABZR87_RS16775	0.40	-0.4
116,980	+		ABZR87_RS16775	0.46	-0.3
116,980	+		ABZR87_RS16775	0.46	-2.3
116,980	+		ABZR87_RS16775	0.46	-2.0
116,980	+		ABZR87_RS16775	0.46	-0.7
116,981	-		ABZR87_RS16775	0.46	+0.3
117,020	+		ABZR87_RS16775	0.49	+0.0
117,020	+		ABZR87_RS16775	0.49	+0.1
117,020	+		ABZR87_RS16775	0.49	-0.9
117,020	+		ABZR87_RS16775	0.49	-0.2
117,020	+		ABZR87_RS16775	0.49	-0.5
117,020	+		ABZR87_RS16775	0.49	+1.1
117,020	+		ABZR87_RS16775	0.49	-1.0
117,020	+		ABZR87_RS16775	0.49	+1.7
117,021	-		ABZR87_RS16775	0.49	-0.7
117,021	-		ABZR87_RS16775	0.49	+0.7
117,021	-		ABZR87_RS16775	0.49	-1.3
117,021	-		ABZR87_RS16775	0.49	-2.8
117,021	-		ABZR87_RS16775	0.49	-0.1
117,021	-		ABZR87_RS16775	0.49	-0.2
117,026	+		ABZR87_RS16775	0.50	-0.1
117,026	+		ABZR87_RS16775	0.50	-0.8
117,026	+		ABZR87_RS16775	0.50	-1.4
117,027	-		ABZR87_RS16775	0.50	-1.6
117,027	-		ABZR87_RS16775	0.50	-1.4
117,144	+		ABZR87_RS16775	0.59	-0.5
117,144	+		ABZR87_RS16775	0.59	-0.8
117,145	-		ABZR87_RS16775	0.59	-1.6
117,145	-		ABZR87_RS16775	0.59	+1.1
117,145	-		ABZR87_RS16775	0.59	+3.3
117,145	-		ABZR87_RS16775	0.59	+0.2