Experiment: Mannan from Saccharomyces cerevisiae (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0127 and BT0128 are separated by 183 nucleotides BT0128 and BT0129 are separated by 105 nucleotides BT0129 and BT0130 are separated by 12 nucleotides
BT0127: BT0127 - putative transmembrane protein (NCBI ptt file), at 120,368 to 123,661
BT0127
BT0128: BT0128 - hypothetical protein (NCBI ptt file), at 123,845 to 124,243
BT0128
BT0129: BT0129 - mannonate dehydratase (NCBI ptt file), at 124,349 to 125,536
BT0129
BT0130: BT0130 - putative oxidoreductase (NCBI ptt file), at 125,549 to 126,364
BT0130
Position (kb) 124
125
126 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 123.360 kb on - strand at 123.363 kb on + strand at 123.437 kb on + strand at 123.556 kb on + strand at 123.677 kb on + strand at 123.678 kb on - strand at 123.882 kb on + strand at 123.934 kb on + strand, within BT0128 at 123.934 kb on + strand, within BT0128 at 123.934 kb on + strand, within BT0128 at 123.935 kb on - strand, within BT0128 at 123.955 kb on + strand, within BT0128 at 123.982 kb on + strand, within BT0128 at 123.983 kb on - strand, within BT0128 at 123.999 kb on + strand, within BT0128 at 124.021 kb on + strand, within BT0128 at 124.021 kb on + strand, within BT0128 at 124.130 kb on + strand, within BT0128 at 124.131 kb on - strand, within BT0128 at 124.132 kb on + strand, within BT0128 at 124.133 kb on - strand, within BT0128 at 124.186 kb on - strand, within BT0128 at 124.267 kb on - strand at 124.278 kb on - strand at 124.299 kb on + strand at 124.396 kb on + strand at 124.397 kb on - strand at 124.404 kb on - strand at 124.424 kb on - strand at 124.440 kb on + strand at 124.451 kb on - strand at 124.506 kb on - strand, within BT0129 at 124.506 kb on - strand, within BT0129 at 124.506 kb on - strand, within BT0129 at 124.549 kb on + strand, within BT0129 at 124.549 kb on + strand, within BT0129 at 124.549 kb on + strand, within BT0129 at 124.549 kb on + strand, within BT0129 at 124.616 kb on + strand, within BT0129 at 124.623 kb on - strand, within BT0129 at 124.640 kb on - strand, within BT0129 at 124.774 kb on + strand, within BT0129 at 124.825 kb on + strand, within BT0129 at 124.825 kb on + strand, within BT0129 at 124.836 kb on + strand, within BT0129 at 124.907 kb on - strand, within BT0129 at 125.151 kb on + strand, within BT0129 at 125.151 kb on + strand, within BT0129 at 125.154 kb on + strand, within BT0129 at 125.164 kb on + strand, within BT0129 at 125.184 kb on + strand, within BT0129 at 125.184 kb on + strand, within BT0129 at 125.184 kb on + strand, within BT0129 at 125.197 kb on + strand, within BT0129 at 125.197 kb on + strand, within BT0129 at 125.198 kb on - strand, within BT0129 at 125.255 kb on - strand, within BT0129 at 125.273 kb on + strand, within BT0129 at 125.316 kb on + strand, within BT0129 at 125.378 kb on + strand, within BT0129 at 125.382 kb on + strand, within BT0129 at 125.551 kb on - strand at 125.660 kb on - strand, within BT0130 at 125.850 kb on - strand, within BT0130 at 125.871 kb on + strand, within BT0130 at 125.969 kb on - strand, within BT0130 at 126.037 kb on - strand, within BT0130 at 126.198 kb on + strand, within BT0130 at 126.327 kb on - strand at 126.333 kb on - strand at 126.346 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Mannan from Saccharomyces cerevisiae (C) remove 123,360 - -1.5 123,363 + +1.7 123,437 + -0.2 123,556 + -0.4 123,677 + -1.2 123,678 - -0.4 123,882 + -0.3 123,934 + BT0128 0.22 +0.1 123,934 + BT0128 0.22 -0.8 123,934 + BT0128 0.22 -1.7 123,935 - BT0128 0.23 -0.8 123,955 + BT0128 0.28 +0.5 123,982 + BT0128 0.34 -0.6 123,983 - BT0128 0.35 -1.4 123,999 + BT0128 0.39 +0.4 124,021 + BT0128 0.44 +0.0 124,021 + BT0128 0.44 +0.3 124,130 + BT0128 0.71 -2.4 124,131 - BT0128 0.72 +1.2 124,132 + BT0128 0.72 -2.8 124,133 - BT0128 0.72 -1.4 124,186 - BT0128 0.85 -0.8 124,267 - -0.2 124,278 - -0.4 124,299 + -1.2 124,396 + -0.1 124,397 - -2.1 124,404 - +0.3 124,424 - -2.1 124,440 + +0.6 124,451 - -1.0 124,506 - BT0129 0.13 +1.7 124,506 - BT0129 0.13 +1.5 124,506 - BT0129 0.13 -1.2 124,549 + BT0129 0.17 -2.1 124,549 + BT0129 0.17 -2.6 124,549 + BT0129 0.17 -0.8 124,549 + BT0129 0.17 +1.7 124,616 + BT0129 0.22 -1.6 124,623 - BT0129 0.23 -0.2 124,640 - BT0129 0.24 -0.2 124,774 + BT0129 0.36 +0.2 124,825 + BT0129 0.40 +2.2 124,825 + BT0129 0.40 -0.8 124,836 + BT0129 0.41 -1.5 124,907 - BT0129 0.47 +1.3 125,151 + BT0129 0.68 -0.6 125,151 + BT0129 0.68 -0.5 125,154 + BT0129 0.68 -2.2 125,164 + BT0129 0.69 -1.5 125,184 + BT0129 0.70 -0.1 125,184 + BT0129 0.70 +0.7 125,184 + BT0129 0.70 -2.9 125,197 + BT0129 0.71 -1.0 125,197 + BT0129 0.71 -1.3 125,198 - BT0129 0.71 +0.4 125,255 - BT0129 0.76 -2.4 125,273 + BT0129 0.78 -0.3 125,316 + BT0129 0.81 -0.4 125,378 + BT0129 0.87 -1.0 125,382 + BT0129 0.87 -1.0 125,551 - -0.8 125,660 - BT0130 0.14 +0.4 125,850 - BT0130 0.37 -0.2 125,871 + BT0130 0.39 -0.8 125,969 - BT0130 0.51 +1.7 126,037 - BT0130 0.60 -1.8 126,198 + BT0130 0.80 +0.7 126,327 - +0.2 126,333 - -2.6 126,346 + +0.8
Or see this region's nucleotide sequence