Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_2366

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
2,431,602	+	prfC	Synpcc7942_2365	0.46	-1.1
2,431,622	-	prfC	Synpcc7942_2365	0.47	+0.3
2,431,651	+	prfC	Synpcc7942_2365	0.49	+0.1
2,431,674	+				-3.0
2,431,703	+	prfC	Synpcc7942_2365	0.52	-1.4
2,431,703	+	prfC	Synpcc7942_2365	0.52	-1.0
2,431,703	+	prfC	Synpcc7942_2365	0.52	-1.4
2,431,711	-	prfC	Synpcc7942_2365	0.52	-2.8
2,431,722	+	prfC	Synpcc7942_2365	0.53	-1.4
2,431,722	+	prfC	Synpcc7942_2365	0.53	+0.2
2,431,722	+	prfC	Synpcc7942_2365	0.53	-0.3
2,431,725	-	prfC	Synpcc7942_2365	0.53	-0.4
2,431,725	-	prfC	Synpcc7942_2365	0.53	-4.0
2,431,743	-	prfC	Synpcc7942_2365	0.54	-1.4
2,431,757	+				-0.8
2,431,767	+	prfC	Synpcc7942_2365	0.56	+0.6
2,431,767	+	prfC	Synpcc7942_2365	0.56	-1.2
2,431,769	+	prfC	Synpcc7942_2365	0.56	+0.2
2,431,769	+	prfC	Synpcc7942_2365	0.56	-1.4
2,431,846	+	prfC	Synpcc7942_2365	0.60	-2.4
2,431,854	-	prfC	Synpcc7942_2365	0.61	+0.9
2,431,870	+	prfC	Synpcc7942_2365	0.62	-1.4
2,431,870	+	prfC	Synpcc7942_2365	0.62	-3.0
2,431,870	+	prfC	Synpcc7942_2365	0.62	-3.0
2,431,870	+	prfC	Synpcc7942_2365	0.62	-2.4
2,431,870	+	prfC	Synpcc7942_2365	0.62	+0.2
2,431,878	-	prfC	Synpcc7942_2365	0.62	-2.0
2,431,899	+	prfC	Synpcc7942_2365	0.63	-1.0
2,431,923	+	prfC	Synpcc7942_2365	0.65	-2.1
2,431,960	-	prfC	Synpcc7942_2365	0.67	-3.0
2,431,971	-	prfC	Synpcc7942_2365	0.68	+0.0
2,431,987	-	prfC	Synpcc7942_2365	0.69	-0.2
2,431,994	-	prfC	Synpcc7942_2365	0.69	+1.6
2,432,041	+	prfC	Synpcc7942_2365	0.72	-1.4
2,432,045	+	prfC	Synpcc7942_2365	0.72	-0.8
2,432,097	+	prfC	Synpcc7942_2365	0.75	-0.4
2,432,105	-	prfC	Synpcc7942_2365	0.76	-1.4
2,432,113	+	prfC	Synpcc7942_2365	0.76	-0.5
2,432,121	-	prfC	Synpcc7942_2365	0.77	-0.4
2,432,125	+	prfC	Synpcc7942_2365	0.77	-0.4
2,432,128	-	prfC	Synpcc7942_2365	0.77	-0.4
2,432,136	+	prfC	Synpcc7942_2365	0.78	-1.4
2,432,152	+	prfC	Synpcc7942_2365	0.79	-3.0
2,432,180	+	prfC	Synpcc7942_2365	0.80	-1.1
2,432,227	-	prfC	Synpcc7942_2365	0.83	-2.4
2,432,263	-	prfC	Synpcc7942_2365	0.85	-2.4
2,432,293	+	prfC	Synpcc7942_2365	0.87	-1.7
2,432,313	+	prfC	Synpcc7942_2365	0.88	-2.0
2,432,315	+	prfC	Synpcc7942_2365	0.88	-0.7
2,432,353	+				-2.0
2,432,356	+				-0.7
2,432,371	+				-0.4
2,432,380	+				-1.4
2,432,380	+				-1.4
2,432,396	+				+0.2
2,432,396	+				-0.4
2,432,415	+				-1.4
2,432,512	-				+1.7
2,432,515	+				-0.4
2,432,515	+				+0.6
2,432,523	-				+1.3
2,432,541	+				+1.2
2,432,544	+				-1.4
2,432,594	-				+0.2
2,432,601	+				+1.0
2,432,601	-				-1.7
2,432,606	-				+0.2
2,432,606	-				+0.6
2,432,609	-				+1.0
2,432,645	-		Synpcc7942_2366	0.16	+1.3
2,432,663	+		Synpcc7942_2366	0.22	+0.7
2,432,697	+		Synpcc7942_2366	0.34	+1.4
2,432,699	+		Synpcc7942_2366	0.35	+0.6
2,432,746	-		Synpcc7942_2366	0.52	+0.8
2,432,748	+		Synpcc7942_2366	0.53	+1.2
2,432,754	+		Synpcc7942_2366	0.55	-0.9
2,432,754	+		Synpcc7942_2366	0.55	+2.7
2,432,754	+		Synpcc7942_2366	0.55	+0.5
2,432,754	+		Synpcc7942_2366	0.55	+3.0
2,432,756	-		Synpcc7942_2366	0.56	+1.7
2,432,756	-		Synpcc7942_2366	0.56	-1.0
2,432,762	-		Synpcc7942_2366	0.58	+0.2
2,432,762	-				-1.4
2,432,787	-		Synpcc7942_2366	0.67	+1.3
2,432,787	-				-0.4
2,432,793	-		Synpcc7942_2366	0.69	+0.9
2,432,795	-		Synpcc7942_2366	0.70	+0.6
2,432,856	-				+0.2
2,432,908	+				+0.2
2,432,908	+				+2.3
2,432,910	+				+2.9
2,432,916	-				-0.6
2,432,956	+				-1.4
2,432,964	-				-2.2
2,432,964	-				-0.2
2,432,964	-				-0.2
2,432,964	-				-0.8
2,432,985	+				+1.0
2,432,985	+				-1.1
2,433,019	+		Synpcc7942_2367	0.13	-0.8
2,433,034	-		Synpcc7942_2367	0.16	+1.6
2,433,053	+		Synpcc7942_2367	0.20	-0.6
2,433,053	-		Synpcc7942_2367	0.20	-1.2
2,433,059	-		Synpcc7942_2367	0.21	-0.3
2,433,059	-		Synpcc7942_2367	0.21	-2.4
2,433,066	-		Synpcc7942_2367	0.23	-1.4
2,433,079	+				-1.4
2,433,080	+		Synpcc7942_2367	0.26	-1.8
2,433,117	+				-2.4
2,433,138	+		Synpcc7942_2367	0.37	-0.2
2,433,143	+		Synpcc7942_2367	0.38	-1.4
2,433,151	-		Synpcc7942_2367	0.40	-1.6
2,433,151	-		Synpcc7942_2367	0.40	+2.3
2,433,194	+		Synpcc7942_2367	0.48	-1.0
2,433,194	+		Synpcc7942_2367	0.48	-3.1
2,433,220	+		Synpcc7942_2367	0.53	+1.1
2,433,220	+		Synpcc7942_2367	0.53	-0.5
2,433,228	-		Synpcc7942_2367	0.55	-2.0
2,433,228	-		Synpcc7942_2367	0.55	+0.4
2,433,228	-		Synpcc7942_2367	0.55	+0.7
2,433,245	+		Synpcc7942_2367	0.58	-0.4
2,433,329	+		Synpcc7942_2367	0.75	-0.2
2,433,329	+		Synpcc7942_2367	0.75	-2.4
2,433,337	-		Synpcc7942_2367	0.77	-1.1
2,433,343	-		Synpcc7942_2367	0.78	+0.2
2,433,343	-		Synpcc7942_2367	0.78	-1.7
2,433,355	+		Synpcc7942_2367	0.80	-1.4
2,433,358	-		Synpcc7942_2367	0.81	-2.1
2,433,395	+		Synpcc7942_2367	0.88	-1.0
2,433,443	-				-1.7
2,433,479	-				-2.2
2,433,632	-				-1.7
2,433,651	-				+0.2
2,433,707	+				+0.9
2,433,715	-				-1.1
2,433,717	+				+1.6
2,433,755	+				-3.2
2,433,755	+				+0.9
2,433,755	+				-0.3
2,433,762	-				+0.4
2,433,763	-				-2.4
2,433,763	-				+1.9
2,433,763	-				+0.2
2,433,765	+				+0.5
2,433,765	+				-2.4
2,433,765	+				-0.1
2,433,765	+				+0.9
2,433,765	+				-3.0
2,433,765	+				-0.4
2,433,765	+				+0.6
2,433,765	+				+1.8
2,433,765	+				-1.0
2,433,765	+				-2.4
2,433,765	+				-0.4
2,433,765	+				+1.9
2,433,765	+				+0.9
2,433,765	+				-1.4
2,433,765	+				-1.4
2,433,765	+				+0.6
2,433,765	+				+0.2
2,433,765	+				-0.4
2,433,765	+				-0.7
2,433,765	+				+0.2
2,433,765	+				+1.6
2,433,767	+				-0.8
2,433,767	+				-1.4
2,433,767	+				-1.4
2,433,773	-				-2.0
2,433,773	-				-0.9
2,433,773	-				-0.4
2,433,773	-				+1.4
2,433,773	-				-0.2
2,433,773	-				-1.2
2,433,773	-				-1.4
2,433,773	-				+0.9
2,433,773	-				+2.6
2,433,773	-				-1.1
2,433,773	-				+1.9
2,433,773	-				-0.0
2,433,773	-				-0.3
2,433,773	-				-3.0
2,433,773	-				-0.4
2,433,773	-				-1.4
2,433,773	-				-0.1
2,433,773	-				+0.8
2,433,773	-				-3.0
2,433,773	-				+0.6
2,433,773	-				-0.6
2,433,775	-				-1.1
2,433,797	-				-0.3
2,433,819	+				-1.0
2,433,867	-				-0.3
2,433,869	-				-1.9
2,433,875	+				-1.4
2,433,875	+				+0.6