Strain Fitness in Synechococcus elongatus PCC 7942 around Synpcc7942_1400

Experiment: Nalidixic 0.00390625 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Nalidixic 0.00390625 mg/ml
1,450,325	-		Synpcc7942_1399	0.21	+1.4
1,450,433	+		Synpcc7942_1399	0.30	+0.9
1,450,466	-		Synpcc7942_1399	0.33	+1.9
1,450,490	+		Synpcc7942_1399	0.35	+0.1
1,450,622	-		Synpcc7942_1399	0.46	-2.4
1,450,622	-		Synpcc7942_1399	0.46	+1.7
1,450,783	-		Synpcc7942_1399	0.60	+0.1
1,450,935	+		Synpcc7942_1399	0.73	+1.2
1,450,988	+		Synpcc7942_1399	0.78	+0.1
1,450,988	+		Synpcc7942_1399	0.78	+1.8
1,450,991	-		Synpcc7942_1399	0.78	+0.9
1,450,996	-		Synpcc7942_1399	0.79	+1.7
1,450,996	-		Synpcc7942_1399	0.79	+2.5
1,450,996	-		Synpcc7942_1399	0.79	+2.3
1,450,998	+		Synpcc7942_1399	0.79	-1.2
1,451,000	+		Synpcc7942_1399	0.79	+2.0
1,451,000	+		Synpcc7942_1399	0.79	+1.1
1,451,002	+		Synpcc7942_1399	0.79	+2.4
1,451,008	-		Synpcc7942_1399	0.80	-0.6
1,451,008	-		Synpcc7942_1399	0.80	+1.0
1,451,008	-		Synpcc7942_1399	0.80	+0.7
1,451,019	-		Synpcc7942_1399	0.81	+0.4
1,451,204	+				+2.3
1,451,252	+				-1.8
1,451,260	-				-2.0
1,451,293	-				+3.1
1,451,293	-				+0.9
1,451,307	+				+2.5
1,451,324	+				+1.7
1,451,364	+				+0.7
1,451,364	-				+0.6
1,451,368	+		Synpcc7942_1400	0.10	+2.6
1,451,376	-		Synpcc7942_1400	0.11	+1.9
1,451,398	+		Synpcc7942_1400	0.13	+0.4
1,451,425	+		Synpcc7942_1400	0.15	+0.5
1,451,433	-		Synpcc7942_1400	0.16	-0.4
1,451,433	-		Synpcc7942_1400	0.16	+0.9
1,451,517	+		Synpcc7942_1400	0.23	+0.3
1,451,517	+		Synpcc7942_1400	0.23	+1.3
1,451,525	-		Synpcc7942_1400	0.24	+2.3
1,451,549	+		Synpcc7942_1400	0.26	-0.7
1,451,629	-		Synpcc7942_1400	0.33	+1.2
1,451,629	-		Synpcc7942_1400	0.33	-0.7
1,451,631	+		Synpcc7942_1400	0.34	+0.1
1,451,631	+		Synpcc7942_1400	0.34	+1.3
1,451,639	-		Synpcc7942_1400	0.34	+0.9
1,451,725	+		Synpcc7942_1400	0.42	+0.9
1,451,753	-		Synpcc7942_1400	0.44	+0.6
1,451,776	-		Synpcc7942_1400	0.46	+1.7
1,451,803	+		Synpcc7942_1400	0.49	+1.7
1,451,803	+		Synpcc7942_1400	0.49	-4.0
1,451,803	+		Synpcc7942_1400	0.49	+1.3
1,451,811	-		Synpcc7942_1400	0.50	+1.8
1,451,811	-		Synpcc7942_1400	0.50	-1.2
1,451,811	-		Synpcc7942_1400	0.50	+2.5
1,451,811	-		Synpcc7942_1400	0.50	+0.4
1,451,811	-		Synpcc7942_1400	0.50	+1.0
1,451,813	+		Synpcc7942_1400	0.50	+1.3
1,451,813	+		Synpcc7942_1400	0.50	+0.1
1,451,821	-		Synpcc7942_1400	0.50	+0.6
1,451,821	-		Synpcc7942_1400	0.50	+1.4
1,451,872	+		Synpcc7942_1400	0.55	+0.2
1,451,908	+		Synpcc7942_1400	0.58	+1.6
1,451,916	-		Synpcc7942_1400	0.59	-2.4
1,451,941	-		Synpcc7942_1400	0.61	+1.1
1,451,973	+		Synpcc7942_1400	0.64	+0.4
1,452,006	-		Synpcc7942_1400	0.67	-3.0
1,452,019	+		Synpcc7942_1400	0.68	-0.3
1,452,034	+		Synpcc7942_1400	0.69	+0.1
1,452,042	-		Synpcc7942_1400	0.70	+1.4
1,452,042	-		Synpcc7942_1400	0.70	-0.2
1,452,057	+		Synpcc7942_1400	0.71	+0.5
1,452,057	+		Synpcc7942_1400	0.71	+1.0
1,452,057	+		Synpcc7942_1400	0.71	+0.9
1,452,057	+		Synpcc7942_1400	0.71	+1.6
1,452,057	+		Synpcc7942_1400	0.71	+0.1
1,452,057	+		Synpcc7942_1400	0.71	+0.2
1,452,065	-		Synpcc7942_1400	0.72	+0.9
1,452,065	-		Synpcc7942_1400	0.72	-0.4
1,452,095	+		Synpcc7942_1400	0.75	+2.5
1,452,114	+		Synpcc7942_1400	0.77	+1.8
1,452,139	+		Synpcc7942_1400	0.79	+1.1
1,452,179	+		Synpcc7942_1400	0.82	+2.4
1,452,192	-		Synpcc7942_1400	0.84	-0.9
1,452,202	-		Synpcc7942_1400	0.84	+1.7
1,452,248	+				-1.4
1,452,316	-				-1.0
1,452,316	-				-0.3
1,452,361	+				+2.0
1,452,369	-				-0.8
1,452,384	-				+1.9
1,452,397	-				+0.6
1,452,404	-				+0.8
1,452,760	+				-2.8
1,453,126	-				-2.5
1,453,158	+				+0.7
1,453,163	-				+0.6
1,453,166	-				+0.1
1,453,199	-				+0.1
1,453,209	-				-0.7
1,453,266	-				+0.3
1,453,295	-				+0.9
1,453,361	+				+0.3