Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5135
Experiment: KB with Benzalkonium Chloride 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | KB with Benzalkonium Chloride 6.25 ug/ml |
---|---|---|---|---|---|
remove | |||||
6,092,467 | - | Psyr_5135 | 0.58 | -2.0 | |
6,092,530 | - | Psyr_5135 | 0.84 | +0.2 | |
6,093,238 | - | +0.6 | |||
6,093,238 | - | -1.8 | |||
6,093,238 | - | -0.6 | |||
6,093,238 | - | -0.3 | |||
6,093,240 | - | +2.5 | |||
6,093,240 | - | -1.9 | |||
6,093,293 | - | +0.2 | |||
6,093,293 | - | +3.9 | |||
6,093,313 | - | -1.5 | |||
6,093,313 | - | +4.0 | |||
6,093,316 | + | -4.4 | |||
6,093,317 | - | +1.2 | |||
6,093,317 | - | -0.4 | |||
6,093,327 | + | +0.2 | |||
6,093,328 | - | -1.4 | |||
6,093,328 | - | +1.8 | |||
6,093,337 | - | -1.1 | |||
6,093,339 | - | +0.4 | |||
6,093,345 | + | +1.2 | |||
6,093,406 | + | +2.5 | |||
6,093,494 | - | +0.0 | |||
6,093,517 | + | -3.4 | |||
6,093,518 | - | -0.1 | |||
6,093,518 | - | +0.1 | |||
6,093,553 | + | +3.8 | |||
6,093,554 | - | -1.2 |
Or see this region's nucleotide sequence