Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_5069

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
6,013,531	+		Psyr_5068	0.64	-0.2
6,013,531	+		Psyr_5068	0.64	+1.0
6,013,531	+		Psyr_5068	0.64	+2.8
6,013,531	+		Psyr_5068	0.64	-1.5
6,013,531	+		Psyr_5068	0.64	+2.5
6,013,531	+		Psyr_5068	0.64	+2.5
6,013,531	+		Psyr_5068	0.64	+3.4
6,013,531	+		Psyr_5068	0.64	+1.1
6,013,531	+		Psyr_5068	0.64	-2.4
6,013,532	-		Psyr_5068	0.64	-2.2
6,013,532	-		Psyr_5068	0.64	-1.2
6,013,532	-		Psyr_5068	0.64	-1.5
6,013,532	-		Psyr_5068	0.64	-0.1
6,013,532	-		Psyr_5068	0.64	+2.2
6,013,532	-		Psyr_5068	0.64	+3.2
6,013,532	-		Psyr_5068	0.64	+1.8
6,014,057	+				-1.0
6,014,059	+				-1.4
6,014,059	+				+3.5
6,014,059	+				-0.8
6,014,059	+				+0.1
6,014,059	+				+1.2
6,014,059	+				+2.2
6,014,059	+				-0.8
6,014,060	-				-0.1
6,014,060	-				+0.6
6,014,060	-				+3.7
6,014,060	-				-0.4
6,014,060	-				+3.0
6,014,060	-				-3.9
6,014,060	-				-3.2
6,014,067	+				-0.2
6,014,068	-				+3.2
6,014,215	+				+2.2
6,014,316	+				+0.1
6,014,316	+				+5.0
6,014,330	+				-0.7
6,014,330	+				-0.8
6,014,330	+				-0.4
6,014,330	+				-1.7
6,014,330	+				+1.2
6,014,330	+				-0.9
6,014,330	+				+1.8
6,014,330	+				+3.7
6,014,330	+				+2.2
6,014,331	-				+1.8
6,014,331	-				-3.1
6,014,331	-				+0.2
6,014,331	-				-1.6
6,014,331	-				+3.7
6,014,331	-				+3.7
6,014,331	-				-2.5
6,014,331	-				+0.1
6,014,331	-				+0.6
6,014,332	+				-2.7
6,014,344	+				-1.6
6,014,344	+				+2.0
6,014,344	+				-0.6
6,014,344	+				-1.7
6,014,344	+				+2.5
6,014,344	+				+0.3
6,014,344	+				+2.2
6,014,344	+				-2.2
6,014,344	+				-2.4
6,014,344	+				-2.8
6,014,344	+				-1.1
6,014,345	-				-0.7
6,014,345	-				+1.8
6,014,345	-				-0.9
6,014,345	-				-1.3
6,014,348	+				-1.2
6,014,348	+				+0.3
6,014,349	-				-0.6
6,014,349	-				+0.6
6,014,386	+				-0.6
6,014,417	-				+3.9
6,014,448	+				+0.5
6,014,448	+				+4.6
6,014,449	-				-1.6
6,014,488	+				-0.5
6,014,488	+				+0.2
6,014,488	+				+2.1
6,014,488	+				+2.1
6,014,488	+				-0.3
6,014,488	+				-0.3
6,014,488	+				+4.1
6,014,489	-				+3.2
6,014,489	-				+2.8
6,014,489	-				+4.6
6,014,489	-				-2.9
6,014,489	-				+3.8
6,014,489	-				+2.5
6,014,527	+		Psyr_5069	0.15	-1.4
6,014,527	+		Psyr_5069	0.15	+4.7
6,014,527	+		Psyr_5069	0.15	+0.1
6,014,527	+		Psyr_5069	0.15	+3.9
6,014,527	+		Psyr_5069	0.15	+3.0
6,014,528	-		Psyr_5069	0.15	-0.7
6,014,528	-		Psyr_5069	0.15	+1.4
6,014,550	+		Psyr_5069	0.20	+3.7
6,014,550	+		Psyr_5069	0.20	+0.6
6,014,550	+		Psyr_5069	0.20	-1.4
6,014,550	+		Psyr_5069	0.20	+4.8
6,014,568	+		Psyr_5069	0.23	-1.6
6,014,598	+		Psyr_5069	0.30	+1.1
6,014,685	+		Psyr_5069	0.48	+0.4
6,014,685	+		Psyr_5069	0.48	-1.2
6,014,685	+		Psyr_5069	0.48	-0.9
6,014,685	+		Psyr_5069	0.48	-0.6
6,014,685	+		Psyr_5069	0.48	-1.1
6,014,685	+		Psyr_5069	0.48	+1.8
6,014,686	-		Psyr_5069	0.48	+0.7
6,014,686	-		Psyr_5069	0.48	+1.8
6,014,686	-		Psyr_5069	0.48	+2.7
6,014,937	+				-0.2
6,014,937	+				-0.2
6,014,937	+				-0.0
6,014,937	+				-1.4
6,014,938	-				-0.3
6,014,938	-				-1.2
6,014,938	-				-0.6
6,014,938	-				-0.4
6,014,990	-				+3.0
6,015,061	+				+1.2
6,015,061	+				+0.1
6,015,061	+				-0.8
6,015,061	+				+0.9
6,015,062	-				-2.4
6,015,217	-		Psyr_5070	0.26	-0.2
6,015,380	+		Psyr_5070	0.45	+3.8
6,015,380	+		Psyr_5070	0.45	-2.5
6,015,523	+		Psyr_5070	0.62	+3.9
6,015,523	+		Psyr_5070	0.62	+0.2
6,015,523	+		Psyr_5070	0.62	-1.2
6,015,524	-				+1.8
6,015,524	-		Psyr_5070	0.62	-1.0
6,015,709	+		Psyr_5070	0.83	-2.6
6,015,709	+		Psyr_5070	0.83	-1.5
6,015,709	+		Psyr_5070	0.83	-1.0
6,015,709	+		Psyr_5070	0.83	+2.5
6,015,710	-		Psyr_5070	0.83	+2.2
6,015,710	-		Psyr_5070	0.83	-0.4
6,015,710	-		Psyr_5070	0.83	-0.0
6,015,710	-		Psyr_5070	0.83	-0.7
6,015,710	-		Psyr_5070	0.83	+0.9
6,015,710	-		Psyr_5070	0.83	+1.2
6,015,710	-		Psyr_5070	0.83	-2.5
6,015,710	-		Psyr_5070	0.83	+0.5
6,015,710	-		Psyr_5070	0.83	-0.2
6,015,710	-		Psyr_5070	0.83	+0.3
6,015,765	-		Psyr_5070	0.90	+1.2
6,015,845	+				-1.1
6,015,845	+				+1.3
6,015,845	+				-0.3
6,015,845	+				-0.3
6,015,846	-				+4.1
6,015,846	-				-1.6
6,015,846	-				-3.2
6,015,846	-				+3.0
6,015,899	+				+3.7
6,015,899	+				-0.8
6,015,899	+				+4.1
6,015,899	+				+1.1
6,015,899	+				+3.2
6,015,900	-				+1.8
6,015,900	-				-1.4
6,015,900	-				+2.2
6,015,900	-				+3.2
6,015,900	-				+1.7
6,015,900	-				+0.6
6,015,900	-				-0.6
6,015,900	-				-0.3
6,015,900	-				-3.2
6,015,901	+				+1.8
6,015,901	+				-0.4
6,015,902	-				-2.2
6,015,902	-				+0.7
6,015,902	-				+4.5
6,015,902	-				+3.2
6,015,902	-				+3.8
6,015,902	-				+0.5
6,015,902	-				+4.5
6,015,902	-				+2.2
6,015,913	+				+2.5
6,015,914	-				+3.5
6,015,921	+				-0.3
6,015,921	+				+1.8
6,015,921	+				+4.4
6,015,922	-				+1.0
6,015,922	-				+0.2
6,015,922	-				+4.2
6,015,939	+				-0.7
6,015,939	+				-0.9
6,015,939	+				+0.3