Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_4026

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
4,793,541	-		Psyr_4025	0.28	-0.8
4,793,583	+		Psyr_4025	0.32	+1.8
4,793,583	+		Psyr_4025	0.32	-1.2
4,793,584	-		Psyr_4025	0.32	-0.8
4,793,584	-		Psyr_4025	0.32	-3.7
4,793,584	-		Psyr_4025	0.32	-0.4
4,793,799	+		Psyr_4025	0.53	+0.1
4,793,800	-		Psyr_4025	0.53	-1.4
4,794,018	+		Psyr_4025	0.74	+0.8
4,794,764	+		Psyr_4026	0.33	-0.3
4,794,841	+		Psyr_4026	0.39	+1.1
4,795,112	+		Psyr_4026	0.60	-0.7
4,795,112	+		Psyr_4026	0.60	+3.5
4,795,112	+		Psyr_4026	0.60	+2.0
4,795,112	+		Psyr_4026	0.60	+3.4
4,795,112	+		Psyr_4026	0.60	+0.8
4,795,112	+		Psyr_4026	0.60	+3.8
4,795,112	+		Psyr_4026	0.60	+3.8
4,795,112	+		Psyr_4026	0.60	+4.4
4,795,112	+		Psyr_4026	0.60	+4.1
4,795,112	+		Psyr_4026	0.60	+2.6
4,795,113	-		Psyr_4026	0.60	-2.8
4,795,113	-		Psyr_4026	0.60	+1.6
4,795,113	-		Psyr_4026	0.60	-2.0
4,795,113	-		Psyr_4026	0.60	+0.7
4,795,113	-		Psyr_4026	0.60	+1.1
4,795,113	-		Psyr_4026	0.60	-0.2
4,795,113	-		Psyr_4026	0.60	-2.7
4,795,113	-		Psyr_4026	0.60	-0.0
4,795,113	-		Psyr_4026	0.60	-0.1
4,795,113	-		Psyr_4026	0.60	+0.1
4,795,113	-		Psyr_4026	0.60	-3.8
4,795,113	-		Psyr_4026	0.60	-1.5
4,795,113	-		Psyr_4026	0.60	-0.7
4,795,113	-		Psyr_4026	0.60	+1.1
4,795,145	-		Psyr_4026	0.63	+0.5
4,795,229	+		Psyr_4026	0.69	-0.1
4,795,229	+		Psyr_4026	0.69	+3.2
4,795,229	+		Psyr_4026	0.69	-0.3
4,795,262	+		Psyr_4026	0.72	-0.9
4,795,262	+		Psyr_4026	0.72	-1.6
4,795,262	+		Psyr_4026	0.72	+5.3
4,795,263	-		Psyr_4026	0.72	+3.3
4,795,263	-		Psyr_4026	0.72	-0.9
4,795,297	+		Psyr_4026	0.74	-1.4
4,795,297	+		Psyr_4026	0.74	+0.8
4,795,297	+		Psyr_4026	0.74	+0.4
4,795,297	+		Psyr_4026	0.74	-1.1
4,795,422	+		Psyr_4026	0.84	-0.4
4,795,422	+		Psyr_4026	0.84	-0.7
4,795,423	-		Psyr_4026	0.84	+2.9
4,795,457	+		Psyr_4026	0.87	+1.7
4,795,457	+		Psyr_4026	0.87	+3.9
4,795,457	+		Psyr_4026	0.87	+0.4
4,795,458	-		Psyr_4026	0.87	+4.2
4,795,458	-		Psyr_4026	0.87	+1.4
4,795,475	+		Psyr_4026	0.88	+0.2
4,795,475	+		Psyr_4026	0.88	-0.5
4,795,475	+		Psyr_4026	0.88	-0.5
4,795,476	-		Psyr_4026	0.88	+0.1
4,795,595	+				+0.4
4,795,596	-				+0.1
4,795,596	-				+1.5
4,795,624	-				-2.5
4,795,672	+				+3.2
4,795,672	+				+2.9
4,795,673	-				+0.9
4,795,681	+				-1.1
4,795,693	+		Psyr_4027	0.10	-0.3
4,795,693	+		Psyr_4027	0.10	-0.2
4,795,693	+		Psyr_4027	0.10	-0.9
4,795,693	+		Psyr_4027	0.10	-1.5
4,795,693	+		Psyr_4027	0.10	-1.1
4,795,693	+		Psyr_4027	0.10	-0.3
4,795,694	-		Psyr_4027	0.11	+0.8
4,795,694	-		Psyr_4027	0.11	+0.6
4,795,694	-		Psyr_4027	0.11	+0.3
4,795,694	-		Psyr_4027	0.11	+3.8
4,795,694	-		Psyr_4027	0.11	+0.1
4,795,694	-		Psyr_4027	0.11	+1.1
4,795,694	-		Psyr_4027	0.11	-1.4
4,795,724	-		Psyr_4027	0.19	-1.4
4,795,724	-		Psyr_4027	0.19	-0.0
4,795,724	-		Psyr_4027	0.19	+4.2
4,795,724	-		Psyr_4027	0.19	-0.5
4,795,762	+		Psyr_4027	0.29	-0.2
4,795,762	+		Psyr_4027	0.29	+4.0
4,795,762	+		Psyr_4027	0.29	+2.1
4,795,763	-		Psyr_4027	0.30	-0.1
4,795,763	-		Psyr_4027	0.30	-0.6
4,795,895	+		Psyr_4027	0.66	+3.6
4,795,949	+		Psyr_4027	0.81	-2.4
4,795,972	+		Psyr_4027	0.88	+2.4
4,795,972	+		Psyr_4027	0.88	+1.1
4,795,972	+		Psyr_4027	0.88	-0.9
4,796,009	+				+0.6
4,796,009	+				-2.2
4,796,009	+				+0.7
4,796,010	-				+3.9
4,796,010	-				+3.2
4,796,010	-				+0.4
4,796,011	+				-2.8
4,796,011	+				+3.4
4,796,011	+				+3.1
4,796,011	+				-0.5
4,796,011	+				-0.8
4,796,011	+				-1.7
4,796,011	+				-0.1
4,796,011	+				+3.6
4,796,011	+				+1.1
4,796,011	+				-0.9
4,796,012	-				+0.1
4,796,012	-				+2.6
4,796,012	-				+0.2
4,796,012	-				-0.2
4,796,012	-				-3.1
4,796,012	-				-2.7
4,796,012	-				+2.9
4,796,012	-				+3.8
4,796,012	-				-0.4
4,796,012	-				+0.1
4,796,012	-				+5.0
4,796,012	-				+2.1
4,796,012	-				+0.4
4,796,012	-				+1.2
4,796,012	-				+2.4
4,796,012	-				+0.5
4,796,160	+				-2.3
4,796,161	-				-1.9
4,796,161	-				+0.1
4,796,216	+				-2.5
4,796,217	-				+1.1
4,796,220	+				-0.2
4,796,220	+				+1.2
4,796,220	+				-2.4
4,796,221	-				+3.4
4,796,221	-				-2.9
4,796,221	-				+0.2
4,796,221	-				+3.5
4,796,221	-				+3.1
4,796,221	-				+2.6
4,796,249	+				+0.0
4,796,249	+				-1.4
4,796,249	+				-1.7
4,796,250	-				+3.1
4,796,255	+				+3.2
4,796,255	+				+0.1
4,796,255	+				-1.3
4,796,255	+				-3.8
4,796,334	+		Psyr_4028	0.29	+1.6
4,796,370	+		Psyr_4028	0.38	+3.1
4,796,370	+		Psyr_4028	0.38	+2.9
4,796,370	+		Psyr_4028	0.38	-0.6
4,796,370	+		Psyr_4028	0.38	+0.1
4,796,371	-		Psyr_4028	0.38	-2.4
4,796,371	-		Psyr_4028	0.38	-0.1
4,796,391	+		Psyr_4028	0.43	+0.2
4,796,391	+		Psyr_4028	0.43	-0.9
4,796,391	+		Psyr_4028	0.43	-2.0
4,796,391	+		Psyr_4028	0.43	-2.7
4,796,392	-		Psyr_4028	0.44	-1.2
4,796,448	+		Psyr_4028	0.58	-3.0
4,796,448	+		Psyr_4028	0.58	-1.6
4,796,448	+		Psyr_4028	0.58	+2.6
4,796,588	+				-2.2
4,796,591	+				-0.7
4,796,591	+				-3.2
4,796,591	+				+0.1
4,796,591	+				+1.1
4,796,591	+				-0.6
4,796,591	+				+1.1
4,796,591	+				-2.2
4,796,592	-				+3.6
4,796,592	-				+2.9
4,796,592	-				-1.2
4,796,592	-				+4.0
4,796,592	-				+1.1
4,796,592	-				-1.9
4,796,592	-				-1.2
4,796,592	-				+2.6
4,796,603	+				-1.5
4,796,608	+				+0.3
4,796,608	+				+1.1