Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3777

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
4,494,927	+		Psyr_3775	0.76	-0.1
4,494,927	+		Psyr_3775	0.76	-0.9
4,494,927	+		Psyr_3775	0.76	+3.1
4,494,928	-		Psyr_3775	0.76	+1.0
4,494,928	-		Psyr_3775	0.76	-2.2
4,494,928	-		Psyr_3775	0.76	-2.1
4,494,928	-		Psyr_3775	0.76	+1.9
4,494,928	-		Psyr_3775	0.76	-0.1
4,494,928	-		Psyr_3775	0.76	+2.5
4,494,950	+		Psyr_3775	0.79	-0.9
4,495,021	+		Psyr_3775	0.87	-0.6
4,495,021	+		Psyr_3775	0.87	-0.2
4,495,022	-		Psyr_3775	0.88	+1.5
4,495,022	-		Psyr_3775	0.88	+1.2
4,495,124	-				-2.1
4,495,147	+				+2.5
4,495,159	+				-2.2
4,495,159	+				-0.1
4,495,160	-				+3.6
4,495,160	-				+3.3
4,495,160	-				+0.5
4,495,167	+				-1.4
4,495,167	+				+4.2
4,495,168	-				+1.5
4,495,168	-				+1.9
4,495,193	-				-1.7
4,495,213	-				+2.8
4,495,556	-		Psyr_3776	0.50	-0.8
4,495,647	+		Psyr_3776	0.71	-1.6
4,495,647	+		Psyr_3776	0.71	+2.9
4,495,647	+		Psyr_3776	0.71	+0.2
4,495,648	-		Psyr_3776	0.71	-1.4
4,495,648	-		Psyr_3776	0.71	-0.6
4,495,648	-		Psyr_3776	0.71	+3.9
4,495,648	-		Psyr_3776	0.71	+4.5
4,495,798	+				+2.5
4,495,798	+				-0.1
4,495,798	+				+2.5
4,495,798	+				-0.9
4,495,799	-				-1.5
4,495,799	-				-1.2
4,495,799	-				+3.8
4,495,885	-		Psyr_3777	0.16	-2.1
4,495,977	+		Psyr_3777	0.35	+0.5
4,495,991	+		Psyr_3777	0.37	-1.3
4,495,992	-		Psyr_3777	0.38	-2.9
4,495,992	-		Psyr_3777	0.38	-3.1
4,496,027	+		Psyr_3777	0.45	-1.8
4,496,048	-		Psyr_3777	0.49	-0.4
4,496,048	-		Psyr_3777	0.49	+0.2
4,496,136	-		Psyr_3777	0.66	-0.5
4,496,265	+				-2.7
4,496,340	+				-1.9
4,496,341	-				+3.3
4,496,397	+				+1.5
4,496,404	+				-0.9
4,496,404	+				+1.9
4,496,405	-				-0.5
4,496,405	-				+1.9
4,496,433	+				-0.5
4,496,433	+				+2.3
4,496,433	+				-2.8
4,496,433	+				+0.1
4,496,433	+				-0.3
4,496,433	+				-2.6
4,496,433	+				+3.5
4,496,434	-				+0.4
4,496,434	-				-2.1
4,496,434	-				+3.5
4,496,434	-				+4.3
4,496,434	-				-1.8
4,496,434	-				-1.6
4,496,434	-				-1.4
4,496,437	+				-1.9
4,496,770	+		Psyr_3778	0.33	+1.4
4,496,770	+		Psyr_3778	0.33	+2.3
4,496,771	-		Psyr_3778	0.33	+0.9
4,496,771	-		Psyr_3778	0.33	+2.5
4,496,800	+		Psyr_3778	0.36	-0.9
4,496,800	+		Psyr_3778	0.36	+0.6
4,496,803	+		Psyr_3778	0.36	-0.8
4,496,803	+		Psyr_3778	0.36	+0.8
4,496,803	+		Psyr_3778	0.36	+0.0
4,496,803	+		Psyr_3778	0.36	-2.0
4,496,804	-		Psyr_3778	0.36	-0.4
4,496,804	-		Psyr_3778	0.36	+3.8
4,496,804	-		Psyr_3778	0.36	-0.4
4,496,996	+		Psyr_3778	0.55	+0.7
4,497,084	+		Psyr_3778	0.64	+2.5
4,497,085	-		Psyr_3778	0.64	+0.1
4,497,085	-		Psyr_3778	0.64	-1.8
4,497,085	-		Psyr_3778	0.64	-0.5
4,497,085	-		Psyr_3778	0.64	-2.4
4,497,085	-		Psyr_3778	0.64	-2.8
4,497,089	-		Psyr_3778	0.64	-2.1
4,497,089	-		Psyr_3778	0.64	+3.4
4,497,251	+		Psyr_3778	0.80	+0.8