Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3766

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
4,482,944	-		Psyr_3764	0.67	-1.9
4,482,979	-		Psyr_3764	0.71	+3.8
4,483,062	+		Psyr_3764	0.81	+3.5
4,483,063	-		Psyr_3764	0.81	-1.3
4,483,169	+				-1.9
4,483,169	+				+2.8
4,483,170	-				+2.5
4,483,215	+				-1.4
4,483,215	+				-1.9
4,483,215	+				+0.9
4,483,216	-				-1.8
4,483,216	-				-4.1
4,483,286	-				+4.0
4,483,286	-				+2.3
4,483,291	-				-0.2
4,483,379	-		Psyr_3765	0.23	-1.7
4,483,379	-		Psyr_3765	0.23	+4.3
4,483,382	+		Psyr_3765	0.23	-1.1
4,483,382	+		Psyr_3765	0.23	-3.2
4,483,382	+		Psyr_3765	0.23	-0.1
4,483,383	-		Psyr_3765	0.23	+4.4
4,483,383	-		Psyr_3765	0.23	+1.5
4,483,383	-		Psyr_3765	0.23	-0.1
4,483,383	-		Psyr_3765	0.23	+3.8
4,483,433	+		Psyr_3765	0.35	-0.9
4,483,433	+		Psyr_3765	0.35	-0.2
4,483,433	+		Psyr_3765	0.35	-1.1
4,483,433	+		Psyr_3765	0.35	+1.9
4,483,434	-		Psyr_3765	0.35	-2.5
4,483,439	+		Psyr_3765	0.36	-0.1
4,483,439	+		Psyr_3765	0.36	-1.1
4,483,439	+		Psyr_3765	0.36	-0.1
4,483,439	+		Psyr_3765	0.36	-0.1
4,483,439	+		Psyr_3765	0.36	+3.1
4,483,439	+		Psyr_3765	0.36	-3.3
4,483,439	+		Psyr_3765	0.36	-1.6
4,483,440	-		Psyr_3765	0.37	+2.9
4,483,440	-		Psyr_3765	0.37	+2.5
4,483,440	-		Psyr_3765	0.37	+2.8
4,483,440	-		Psyr_3765	0.37	-1.8
4,483,440	-		Psyr_3765	0.37	+3.5
4,483,440	-		Psyr_3765	0.37	+0.6
4,483,440	-		Psyr_3765	0.37	-1.1
4,483,456	-		Psyr_3765	0.40	+4.2
4,483,568	-		Psyr_3765	0.66	-0.4
4,483,622	+		Psyr_3765	0.78	-1.7
4,483,654	+		Psyr_3765	0.86	+0.2
4,483,734	+				-0.1
4,483,740	+				-0.3
4,483,795	-				+2.9
4,483,984	+				+3.4
4,483,984	+				+3.1
4,483,984	+				+2.5
4,484,002	+		Psyr_3766	0.11	-0.4
4,484,034	+		Psyr_3766	0.16	+4.4
4,484,034	+		Psyr_3766	0.16	+3.7
4,484,035	-		Psyr_3766	0.16	+4.6
4,484,091	+		Psyr_3766	0.23	+1.0
4,484,092	-		Psyr_3766	0.24	+3.4
4,484,092	-		Psyr_3766	0.24	+2.0
4,484,199	+		Psyr_3766	0.38	-1.2
4,484,199	+		Psyr_3766	0.38	+2.3
4,484,199	+		Psyr_3766	0.38	-0.0
4,484,199	+		Psyr_3766	0.38	-0.3
4,484,200	-		Psyr_3766	0.38	+2.3
4,484,200	-		Psyr_3766	0.38	-2.9
4,484,236	+		Psyr_3766	0.43	+1.5
4,484,237	-		Psyr_3766	0.43	+2.8
4,484,239	-		Psyr_3766	0.44	+3.4
4,484,363	+		Psyr_3766	0.61	-0.6
4,484,363	+		Psyr_3766	0.61	-1.9
4,484,572	+		Psyr_3766	0.89	+3.9
4,484,572	+		Psyr_3766	0.89	-3.5
4,484,573	-		Psyr_3766	0.89	+0.4
4,484,575	+		Psyr_3766	0.90	-2.8
4,484,576	-		Psyr_3766	0.90	+2.8
4,484,576	-		Psyr_3766	0.90	+3.7
4,484,761	+				-2.6
4,484,762	-				+0.9
4,484,812	+				+2.1
4,484,834	+				-1.5
4,484,834	+				-1.2
4,484,834	+				+3.0
4,484,834	+				-1.1
4,484,834	+				+1.7
4,484,834	+				-2.1
4,484,834	+				-0.7
4,484,834	+				-2.5
4,484,834	+				+1.0
4,484,834	+				-0.5
4,484,834	+				-2.2
4,484,834	+				+1.5
4,484,834	+				-2.4
4,484,834	+				+1.0
4,484,834	+				-0.0
4,484,835	-				-0.0
4,484,835	-				-2.1
4,484,835	-				-3.9
4,484,835	-				-0.5
4,484,835	-				+0.6
4,484,835	-				+0.8
4,484,835	-				-1.0
4,484,835	-				+2.0
4,484,835	-				+3.3
4,484,835	-				-0.7
4,484,835	-				-0.6
4,484,838	+				-1.2
4,484,838	+				-3.0
4,484,838	+				-1.0
4,484,838	+				+1.0
4,484,838	+				-0.0
4,484,838	+				+3.1
4,484,838	+				+2.3
4,484,839	-				+4.5
4,484,839	-				-2.0
4,484,839	-				-1.6
4,484,839	-				-0.0
4,484,839	-				+0.5
4,484,839	-				+0.6
4,484,839	-				+2.0
4,484,839	-				-0.4
4,484,839	-				+1.0
4,484,872	-		Psyr_3767	0.14	+3.9
4,484,872	-		Psyr_3767	0.14	-1.8
4,484,903	-		Psyr_3767	0.26	+0.4
4,484,903	-		Psyr_3767	0.26	-1.9
4,484,903	-		Psyr_3767	0.26	-0.3
4,484,908	+		Psyr_3767	0.28	-0.5
4,484,909	-		Psyr_3767	0.28	+2.5
4,484,941	+		Psyr_3767	0.40	-4.7
4,484,941	+		Psyr_3767	0.40	-2.1
4,484,942	-		Psyr_3767	0.40	-1.2
4,484,987	+		Psyr_3767	0.57	+1.5
4,485,027	+		Psyr_3767	0.72	-0.0
4,485,027	+		Psyr_3767	0.72	-0.0
4,485,028	-		Psyr_3767	0.72	+1.5
4,485,028	-		Psyr_3767	0.72	-0.2
4,485,028	-		Psyr_3767	0.72	-3.6
4,485,084	+				+1.5
4,485,085	-				-0.5
4,485,085	-				+3.9
4,485,124	+				+1.0
4,485,137	-				-2.2
4,485,316	+				+2.8
4,485,317	-				+3.0
4,485,317	-				+1.0
4,485,317	-				-1.7
4,485,320	+				-0.7
4,485,387	+				+1.0
4,485,388	-				-0.9
4,485,388	-				-0.6
4,485,388	-				+2.0
4,485,444	+				-3.2
4,485,619	-				+3.9