Experiment: KB with Benzalkonium Chloride 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_3580 and Psyr_3581 are separated by 271 nucleotides Psyr_3581 and Psyr_3582 are separated by 184 nucleotides Psyr_3582 and Psyr_3583 are separated by 304 nucleotides
Psyr_3580: Psyr_3580 - aromatic amino acid:proton symporter, AAT family, at 4,262,944 to 4,264,353
_3580
Psyr_3581: Psyr_3581 - ribosomal large subunit pseudouridine synthase B, at 4,264,625 to 4,265,854
_3581
Psyr_3582: Psyr_3582 - Protein of unknown function DUF1289, at 4,266,039 to 4,266,230
_3582
Psyr_3583: Psyr_3583 - condensin subunit ScpB, at 4,266,535 to 4,267,302
_3583
Position (kb) 4264
4265
4266 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1
2
3
4
5 at 4263.626 kb on + strand, within Psyr_3580 at 4263.626 kb on + strand, within Psyr_3580 at 4263.627 kb on - strand, within Psyr_3580 at 4263.656 kb on - strand, within Psyr_3580 at 4263.656 kb on - strand, within Psyr_3580 at 4263.836 kb on + strand, within Psyr_3580 at 4263.836 kb on + strand, within Psyr_3580 at 4263.836 kb on + strand, within Psyr_3580 at 4263.836 kb on + strand, within Psyr_3580 at 4263.836 kb on + strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4263.837 kb on - strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.004 kb on + strand, within Psyr_3580 at 4264.005 kb on - strand, within Psyr_3580 at 4264.005 kb on - strand, within Psyr_3580 at 4264.005 kb on - strand, within Psyr_3580 at 4264.005 kb on - strand, within Psyr_3580 at 4264.005 kb on - strand, within Psyr_3580 at 4264.046 kb on + strand, within Psyr_3580 at 4264.046 kb on + strand, within Psyr_3580 at 4264.046 kb on + strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.047 kb on - strand, within Psyr_3580 at 4264.097 kb on + strand, within Psyr_3580 at 4264.098 kb on - strand, within Psyr_3580 at 4264.098 kb on - strand, within Psyr_3580 at 4264.098 kb on - strand, within Psyr_3580 at 4264.391 kb on + strand at 4264.391 kb on + strand at 4264.391 kb on + strand at 4264.392 kb on - strand at 4264.392 kb on - strand at 4264.491 kb on + strand at 4264.491 kb on + strand at 4264.491 kb on + strand at 4264.491 kb on + strand at 4264.492 kb on - strand at 4265.228 kb on + strand, within Psyr_3581 at 4265.228 kb on + strand, within Psyr_3581 at 4265.228 kb on + strand, within Psyr_3581 at 4265.229 kb on - strand, within Psyr_3581 at 4265.229 kb on - strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.604 kb on + strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.605 kb on - strand, within Psyr_3581 at 4265.944 kb on - strand at 4265.944 kb on - strand at 4265.944 kb on - strand at 4265.944 kb on - strand at 4265.944 kb on - strand at 4266.355 kb on + strand at 4266.355 kb on + strand at 4266.356 kb on - strand at 4266.383 kb on + strand at 4266.383 kb on + strand at 4266.384 kb on - strand at 4266.384 kb on - strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.387 kb on + strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.388 kb on - strand at 4266.444 kb on - strand at 4266.498 kb on - strand at 4266.498 kb on - strand at 4266.498 kb on - strand at 4266.529 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Benzalkonium Chloride 6.25 ug/ml remove 4,263,626 + Psyr_3580 0.48 -0.0 4,263,626 + Psyr_3580 0.48 -0.5 4,263,627 - Psyr_3580 0.48 -2.1 4,263,656 - Psyr_3580 0.50 -2.8 4,263,656 - Psyr_3580 0.50 +2.9 4,263,836 + Psyr_3580 0.63 -1.6 4,263,836 + Psyr_3580 0.63 -4.1 4,263,836 + Psyr_3580 0.63 +3.8 4,263,836 + Psyr_3580 0.63 +1.9 4,263,836 + Psyr_3580 0.63 +3.4 4,263,837 - Psyr_3580 0.63 +3.4 4,263,837 - Psyr_3580 0.63 -0.6 4,263,837 - Psyr_3580 0.63 -2.4 4,263,837 - Psyr_3580 0.63 +3.2 4,263,837 - Psyr_3580 0.63 +2.2 4,263,837 - Psyr_3580 0.63 +3.7 4,263,837 - Psyr_3580 0.63 +0.9 4,263,837 - Psyr_3580 0.63 -1.7 4,263,837 - Psyr_3580 0.63 +0.7 4,264,004 + Psyr_3580 0.75 +1.8 4,264,004 + Psyr_3580 0.75 -0.6 4,264,004 + Psyr_3580 0.75 +2.5 4,264,004 + Psyr_3580 0.75 -0.7 4,264,004 + Psyr_3580 0.75 +2.9 4,264,004 + Psyr_3580 0.75 -2.3 4,264,004 + Psyr_3580 0.75 +0.2 4,264,005 - Psyr_3580 0.75 -1.7 4,264,005 - Psyr_3580 0.75 +2.7 4,264,005 - Psyr_3580 0.75 -0.3 4,264,005 - Psyr_3580 0.75 -1.7 4,264,005 - Psyr_3580 0.75 -0.8 4,264,046 + Psyr_3580 0.78 -0.9 4,264,046 + Psyr_3580 0.78 -0.5 4,264,046 + Psyr_3580 0.78 +2.9 4,264,047 - Psyr_3580 0.78 +0.1 4,264,047 - Psyr_3580 0.78 +0.9 4,264,047 - Psyr_3580 0.78 -1.5 4,264,047 - Psyr_3580 0.78 +0.7 4,264,047 - Psyr_3580 0.78 +0.9 4,264,047 - Psyr_3580 0.78 -1.3 4,264,047 - Psyr_3580 0.78 -0.5 4,264,047 - Psyr_3580 0.78 +3.1 4,264,047 - Psyr_3580 0.78 -1.5 4,264,097 + Psyr_3580 0.82 +1.7 4,264,098 - Psyr_3580 0.82 +2.7 4,264,098 - Psyr_3580 0.82 -1.5 4,264,098 - Psyr_3580 0.82 +1.5 4,264,391 + +1.9 4,264,391 + +0.0 4,264,391 + -0.1 4,264,392 - -1.4 4,264,392 - +2.2 4,264,491 + -0.6 4,264,491 + -0.5 4,264,491 + -2.1 4,264,491 + -0.3 4,264,492 - +3.8 4,265,228 + Psyr_3581 0.49 -3.6 4,265,228 + Psyr_3581 0.49 -0.1 4,265,228 + Psyr_3581 0.49 -3.8 4,265,229 - Psyr_3581 0.49 +1.9 4,265,229 - Psyr_3581 0.49 -0.9 4,265,604 + Psyr_3581 0.80 -0.1 4,265,604 + Psyr_3581 0.80 -2.2 4,265,604 + Psyr_3581 0.80 +0.9 4,265,604 + Psyr_3581 0.80 -1.1 4,265,604 + Psyr_3581 0.80 -2.7 4,265,604 + Psyr_3581 0.80 -0.1 4,265,604 + Psyr_3581 0.80 +0.9 4,265,604 + Psyr_3581 0.80 +0.9 4,265,604 + Psyr_3581 0.80 -2.3 4,265,605 - Psyr_3581 0.80 -2.3 4,265,605 - Psyr_3581 0.80 -2.4 4,265,605 - Psyr_3581 0.80 +1.5 4,265,605 - Psyr_3581 0.80 +2.7 4,265,605 - Psyr_3581 0.80 -5.3 4,265,605 - Psyr_3581 0.80 +0.9 4,265,605 - Psyr_3581 0.80 +0.9 4,265,605 - Psyr_3581 0.80 -2.3 4,265,605 - Psyr_3581 0.80 -2.7 4,265,944 - -0.1 4,265,944 - +3.4 4,265,944 - -2.1 4,265,944 - -1.3 4,265,944 - -3.3 4,266,355 + +4.1 4,266,355 + +5.2 4,266,356 - -1.4 4,266,383 + -2.9 4,266,383 + -1.4 4,266,384 - +1.4 4,266,384 - +1.9 4,266,387 + +2.2 4,266,387 + +1.5 4,266,387 + +3.7 4,266,387 + +2.5 4,266,387 + -4.0 4,266,387 + +2.5 4,266,387 + +3.8 4,266,387 + +3.6 4,266,387 + -0.6 4,266,387 + +1.9 4,266,388 - +3.1 4,266,388 - +1.0 4,266,388 - +3.1 4,266,388 - -0.3 4,266,388 - +1.9 4,266,388 - +1.5 4,266,388 - -2.4 4,266,388 - -0.4 4,266,388 - -2.7 4,266,388 - +3.4 4,266,388 - -0.3 4,266,388 - +0.8 4,266,388 - -1.8 4,266,388 - +1.9 4,266,388 - +0.9 4,266,388 - -1.4 4,266,388 - +0.8 4,266,388 - -0.8 4,266,388 - +3.5 4,266,388 - -0.7 4,266,388 - -0.9 4,266,444 - -0.3 4,266,498 - -1.4 4,266,498 - -0.2 4,266,498 - -1.0 4,266,529 - -1.9
Or see this region's nucleotide sequence