Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3488

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
4,156,726	+				-3.8
4,156,731	-				+3.0
4,156,908	+		Psyr_3487	0.22	-0.6
4,156,908	+		Psyr_3487	0.22	-0.9
4,156,909	-		Psyr_3487	0.22	+1.5
4,156,909	-		Psyr_3487	0.22	+1.6
4,156,909	-		Psyr_3487	0.22	-0.1
4,156,909	-		Psyr_3487	0.22	-1.8
4,156,909	-		Psyr_3487	0.22	+0.7
4,156,916	+		Psyr_3487	0.23	-0.6
4,156,916	+		Psyr_3487	0.23	-1.0
4,156,916	+		Psyr_3487	0.23	+4.2
4,156,916	+		Psyr_3487	0.23	+0.4
4,156,916	+		Psyr_3487	0.23	-2.0
4,156,916	+		Psyr_3487	0.23	-3.3
4,156,917	-		Psyr_3487	0.23	+1.4
4,156,917	-		Psyr_3487	0.23	+0.4
4,156,917	-		Psyr_3487	0.23	+0.3
4,156,953	+		Psyr_3487	0.28	+1.9
4,156,954	-		Psyr_3487	0.28	-2.1
4,156,954	-		Psyr_3487	0.28	-0.8
4,156,954	-		Psyr_3487	0.28	+0.6
4,157,114	+		Psyr_3487	0.49	-1.2
4,157,419	-		Psyr_3487	0.90	+0.3
4,157,492	-				-1.1
4,157,492	-				+1.9
4,157,495	+				+1.9
4,157,495	+				+0.9
4,157,495	+				-0.7
4,157,495	+				-1.0
4,157,495	+				-2.7
4,157,495	+				+1.9
4,157,496	-				-0.8
4,157,496	-				+3.3
4,157,496	-				-1.7
4,157,496	-				+0.2
4,157,496	-				-1.0
4,157,496	-				-2.1
4,157,496	-				+4.3
4,157,971	+				+0.5
4,157,972	-				+3.7
4,158,034	+				+1.4
4,158,034	+				+3.6
4,158,035	-				-0.6
4,158,035	-				+3.9
4,158,035	-				-0.1
4,158,203	-		Psyr_3489	0.38	-0.7
4,158,276	+		Psyr_3489	0.54	+1.9
4,158,424	+		Psyr_3489	0.86	+1.4
4,158,424	+		Psyr_3489	0.86	+1.4
4,158,424	+		Psyr_3489	0.86	-0.2
4,158,424	+		Psyr_3489	0.86	+2.7
4,158,425	-		Psyr_3489	0.86	+0.9
4,158,432	-		Psyr_3489	0.87	-1.9
4,158,432	-		Psyr_3489	0.87	+1.9
4,158,432	-		Psyr_3489	0.87	+3.6
4,158,457	+				+0.9
4,158,489	-				-0.5
4,158,499	-				-0.5
4,158,547	-				-1.7
4,158,549	+				-3.7
4,158,549	+				-0.7
4,158,623	+				+4.1
4,158,623	+				-0.1
4,158,624	-				-1.7
4,158,624	-				+2.2
4,158,624	-				+1.4
4,158,624	-				+0.6
4,158,624	-				-2.5
4,158,686	+		Psyr_3490	0.15	+1.9
4,158,687	-		Psyr_3490	0.15	+0.9
4,158,687	-		Psyr_3490	0.15	-1.1
4,158,720	+		Psyr_3490	0.20	+1.4
4,158,720	+		Psyr_3490	0.20	+0.9
4,158,721	-		Psyr_3490	0.20	+2.9
4,158,721	-		Psyr_3490	0.20	-4.4
4,158,860	+		Psyr_3490	0.38	+2.2
4,158,861	-		Psyr_3490	0.39	-1.3
4,158,861	-		Psyr_3490	0.39	-2.5
4,158,903	+		Psyr_3490	0.44	-0.6
4,158,904	-		Psyr_3490	0.44	-1.9
4,158,904	-		Psyr_3490	0.44	+1.4
4,158,934	-		Psyr_3490	0.48	-3.8