Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3196

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,825,080	+		Psyr_3195	0.58	-0.0
3,825,080	+		Psyr_3195	0.58	-1.8
3,825,081	-		Psyr_3195	0.59	-1.5
3,825,081	-		Psyr_3195	0.59	+3.1
3,825,117	+		Psyr_3195	0.63	-1.6
3,825,118	-		Psyr_3195	0.64	+2.4
3,825,131	+		Psyr_3195	0.65	+4.6
3,825,131	+		Psyr_3195	0.65	-1.1
3,825,131	+		Psyr_3195	0.65	+2.1
3,825,131	+		Psyr_3195	0.65	-2.6
3,825,132	-		Psyr_3195	0.65	+3.1
3,825,366	+				-0.8
3,825,412	-				+0.3
3,825,412	-				+2.1
3,825,455	+				+2.4
3,825,455	+				+0.2
3,825,455	+				-2.3
3,825,456	-				+0.4
3,825,459	+				+0.8
3,825,460	-				+1.4
3,825,460	-				-0.2
3,825,667	+				-5.4
3,825,796	-				+0.1
3,825,840	+				-0.1
3,825,840	+				-2.2
3,825,841	-				-1.7
3,825,841	-				+2.4
3,825,841	-				+0.5
3,825,896	+				+4.2
3,825,896	+				-0.8
3,825,896	+				+4.1
3,825,896	+				+4.0
3,825,897	-				+3.8
3,825,897	-				+4.4
3,825,903	-				-1.0
3,825,903	-				+4.0
3,825,911	-				+2.1
3,825,943	-				-0.3
3,826,001	+				+3.5
3,826,001	+				-1.4
3,826,002	-				-1.1
3,826,002	-				+3.5
3,826,002	-				-2.3
3,826,205	+		Psyr_3196	0.22	-0.7
3,826,205	+		Psyr_3196	0.22	+1.3
3,826,205	+		Psyr_3196	0.22	+3.1
3,826,206	-		Psyr_3196	0.22	+1.8
3,826,206	-		Psyr_3196	0.22	-1.3
3,826,206	-				+1.4
3,826,206	-		Psyr_3196	0.22	-2.7
3,826,206	-		Psyr_3196	0.22	+2.6
3,826,206	-		Psyr_3196	0.22	-0.6
3,826,206	-		Psyr_3196	0.22	+3.1
3,826,379	+		Psyr_3196	0.35	-3.4
3,826,379	+		Psyr_3196	0.35	+3.1
3,826,379	+		Psyr_3196	0.35	+0.8
3,826,380	-		Psyr_3196	0.35	-1.2
3,826,380	-		Psyr_3196	0.35	-1.7
3,826,380	-		Psyr_3196	0.35	+4.2
3,826,388	+		Psyr_3196	0.36	+2.8
3,826,389	-		Psyr_3196	0.36	-0.6
3,826,445	+		Psyr_3196	0.40	+3.7
3,826,445	+		Psyr_3196	0.40	-0.1
3,826,445	+		Psyr_3196	0.40	+2.6
3,826,446	-		Psyr_3196	0.40	+1.1
3,826,545	+		Psyr_3196	0.47	+1.5
3,826,545	+		Psyr_3196	0.47	+1.0
3,826,683	-		Psyr_3196	0.58	+3.1
3,826,683	-		Psyr_3196	0.58	+1.4
3,826,727	+		Psyr_3196	0.61	+2.1
3,826,727	+		Psyr_3196	0.61	-1.6
3,826,727	+		Psyr_3196	0.61	-0.6
3,826,727	+		Psyr_3196	0.61	+0.4
3,826,727	+		Psyr_3196	0.61	+0.9
3,826,727	+		Psyr_3196	0.61	-2.0
3,826,728	-		Psyr_3196	0.61	-1.5
3,826,728	-		Psyr_3196	0.61	-0.3
3,826,886	+		Psyr_3196	0.73	-2.5
3,826,887	-		Psyr_3196	0.73	+0.2
3,826,973	+		Psyr_3196	0.80	-0.5
3,826,974	-		Psyr_3196	0.80	+0.5
3,826,974	-		Psyr_3196	0.80	-1.7
3,827,069	+		Psyr_3196	0.87	-0.8
3,827,154	-				-0.8
3,827,332	-				+3.7
3,827,353	+				+2.1
3,827,355	+				-1.5
3,827,356	-				-0.7
3,827,369	+				-2.2
3,827,369	+				-1.8
3,827,371	+				-3.0
3,827,372	-				+1.6
3,827,372	-				-0.2
3,827,392	-				-2.3
3,827,417	+				-1.5
3,827,418	-				+3.2
3,827,464	+				-4.2
3,827,489	+				-3.0
3,827,490	-				+3.1
3,827,490	-				+2.4
3,827,493	+				+3.2
3,827,494	-				+4.2
3,828,045	+		Psyr_3197	0.82	+1.8
3,828,045	+		Psyr_3197	0.82	-1.7
3,828,136	+				+0.8
3,828,137	-				+1.4
3,828,241	+		Psyr_3198	0.16	+0.8
3,828,241	+		Psyr_3198	0.16	+2.1
3,828,241	+		Psyr_3198	0.16	+3.2
3,828,242	-		Psyr_3198	0.17	+2.4