Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3125

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,746,921	-		Psyr_3124	0.67	+1.8
3,746,952	-		Psyr_3124	0.69	-0.9
3,747,139	+		Psyr_3124	0.77	+3.1
3,747,139	+		Psyr_3124	0.77	+1.4
3,747,270	-		Psyr_3124	0.84	-0.6
3,747,575	+				+1.8
3,747,576	-				-0.2
3,747,576	-				+0.1
3,747,576	-				-1.9
3,747,605	+				+0.8
3,747,620	+				+2.4
3,747,620	+				+3.5
3,747,620	+				-0.2
3,747,620	+				+1.4
3,747,620	+				+2.8
3,747,620	+				-3.8
3,747,620	+				+3.6
3,747,620	+				+3.4
3,747,620	+				+4.0
3,747,621	-				+2.4
3,747,621	-				+0.3
3,747,621	-				-1.5
3,747,621	-				+2.8
3,747,621	-				+2.4
3,747,739	-				+3.0
3,747,739	-				-0.5
3,747,747	+				+2.4
3,747,785	-				-1.5
3,747,785	-				-1.6
3,747,791	+				+2.4
3,747,867	+				-0.2
3,747,867	+				-0.8
3,747,867	+				-0.0
3,747,868	-				-1.4
3,748,050	+		Psyr_3125	0.38	+0.2
3,748,084	+		Psyr_3125	0.43	-0.8
3,748,084	+		Psyr_3125	0.43	+0.8
3,748,084	+		Psyr_3125	0.43	+4.2
3,748,085	-		Psyr_3125	0.43	+2.4
3,748,085	-		Psyr_3125	0.43	+2.4
3,748,085	-		Psyr_3125	0.43	+1.8
3,748,179	+		Psyr_3125	0.58	-2.0
3,748,180	-		Psyr_3125	0.58	-0.2
3,748,205	+		Psyr_3125	0.62	-1.2
3,748,206	-		Psyr_3125	0.62	-2.1
3,748,592	+				+2.1
3,748,592	+				-2.4
3,748,592	+				-2.2
3,748,593	-				+3.1
3,748,606	+				-0.5
3,748,606	+				-2.7
3,748,606	+				+0.3
3,748,607	-				-1.0
3,748,607	-				+1.3
3,748,607	-				-1.5
3,748,607	-				+4.2
3,748,607	-				-0.6
3,748,607	-				-1.0
3,749,031	+		Psyr_3126	0.47	+1.4
3,749,031	+		Psyr_3126	0.47	+1.4
3,749,031	+		Psyr_3126	0.47	-4.5
3,749,031	+		Psyr_3126	0.47	-1.8
3,749,031	+		Psyr_3126	0.47	-0.2
3,749,031	+		Psyr_3126	0.47	+4.0
3,749,031	+		Psyr_3126	0.47	-2.8
3,749,031	+		Psyr_3126	0.47	-0.4
3,749,032	-		Psyr_3126	0.47	-3.0
3,749,032	-		Psyr_3126	0.47	+3.4
3,749,032	-		Psyr_3126	0.47	-3.4
3,749,032	-		Psyr_3126	0.47	+3.0
3,749,204	-		Psyr_3126	0.65	+1.4
3,749,278	+		Psyr_3126	0.73	+3.4
3,749,278	+		Psyr_3126	0.73	-1.2
3,749,278	+		Psyr_3126	0.73	-1.7
3,749,278	+		Psyr_3126	0.73	-1.0
3,749,278	+		Psyr_3126	0.73	+0.0
3,749,279	-		Psyr_3126	0.73	+1.8
3,749,279	-		Psyr_3126	0.73	+0.8
3,749,279	-		Psyr_3126	0.73	+0.2
3,749,283	+		Psyr_3126	0.74	-1.8
3,749,283	+		Psyr_3126	0.74	+2.1
3,749,283	+		Psyr_3126	0.74	+3.1
3,749,283	+		Psyr_3126	0.74	-1.1
3,749,284	-		Psyr_3126	0.74	+0.5
3,749,284	-		Psyr_3126	0.74	+3.2
3,749,284	-		Psyr_3126	0.74	-0.2
3,749,290	+		Psyr_3126	0.74	+0.8
3,749,291	-		Psyr_3126	0.75	+0.1
3,749,291	-		Psyr_3126	0.75	+3.0