Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_3059

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,656,618	+		Psyr_3058	0.72	-1.8
3,656,619	-		Psyr_3058	0.72	+4.6
3,656,619	-		Psyr_3058	0.72	-0.9
3,656,797	-		Psyr_3058	0.85	+2.7
3,656,878	+				+2.0
3,656,878	+				-0.3
3,656,878	+				-1.5
3,656,879	-				-2.4
3,656,879	-				+2.0
3,656,879	-				+1.3
3,657,037	-				-1.9
3,657,051	+				+3.4
3,657,052	-				+2.7
3,657,052	-				+3.8
3,657,088	+				-2.2
3,657,833	+		Psyr_3059	0.32	-1.0
3,657,834	-		Psyr_3059	0.32	+2.9
3,657,834	-		Psyr_3059	0.32	-0.7
3,657,834	-		Psyr_3059	0.32	-1.1
3,657,842	-		Psyr_3059	0.33	-2.2
3,657,842	-		Psyr_3059	0.33	+3.3
3,657,842	-		Psyr_3059	0.33	-0.3
3,657,919	+		Psyr_3059	0.37	+1.3
3,657,919	+		Psyr_3059	0.37	+0.7
3,657,919	+		Psyr_3059	0.37	+2.0
3,657,919	+		Psyr_3059	0.37	+0.7
3,657,919	+		Psyr_3059	0.37	-0.3
3,657,919	+		Psyr_3059	0.37	+2.9
3,657,919	+		Psyr_3059	0.37	+0.2
3,657,920	-		Psyr_3059	0.37	+2.0
3,657,920	-		Psyr_3059	0.37	+2.3
3,657,920	-		Psyr_3059	0.37	-0.2
3,657,920	-		Psyr_3059	0.37	+0.1
3,657,920	-		Psyr_3059	0.37	-0.8
3,657,920	-		Psyr_3059	0.37	-2.2
3,657,920	-		Psyr_3059	0.37	-1.5
3,657,924	-		Psyr_3059	0.38	-0.1
3,657,924	-		Psyr_3059	0.38	+1.7
3,658,024	-		Psyr_3059	0.44	+0.1
3,658,024	-		Psyr_3059	0.44	+0.7
3,658,024	-		Psyr_3059	0.44	+2.7
3,658,103	-		Psyr_3059	0.49	+1.7
3,658,103	-		Psyr_3059	0.49	-1.8
3,658,247	+		Psyr_3059	0.58	-2.3
3,658,247	+		Psyr_3059	0.58	-0.3
3,658,247	+		Psyr_3059	0.58	+2.7
3,658,248	-		Psyr_3059	0.58	-2.5
3,658,248	-		Psyr_3059	0.58	-2.2
3,658,248	-		Psyr_3059	0.58	-0.9
3,658,248	-		Psyr_3059	0.58	+3.4
3,658,248	-		Psyr_3059	0.58	-2.5
3,658,248	-		Psyr_3059	0.58	+1.3
3,658,248	-		Psyr_3059	0.58	-0.7
3,658,248	-		Psyr_3059	0.58	+1.7
3,658,249	+		Psyr_3059	0.58	+0.5
3,658,249	+		Psyr_3059	0.58	+1.6
3,658,288	+		Psyr_3059	0.60	-2.6
3,658,288	+		Psyr_3059	0.60	-0.4
3,658,288	+		Psyr_3059	0.60	-4.4
3,658,288	+		Psyr_3059	0.60	+2.5
3,658,289	-		Psyr_3059	0.60	+0.7
3,658,289	-		Psyr_3059	0.60	-2.0
3,658,289	-		Psyr_3059	0.60	-2.4
3,658,289	-		Psyr_3059	0.60	-1.9
3,658,289	-		Psyr_3059	0.60	-1.0
3,658,289	-		Psyr_3059	0.60	+1.3
3,658,290	+		Psyr_3059	0.60	-1.7
3,658,291	-		Psyr_3059	0.61	+3.5
3,658,291	-		Psyr_3059	0.61	-0.1
3,658,292	+		Psyr_3059	0.61	-1.0
3,658,292	+		Psyr_3059	0.61	-0.1
3,658,292	+		Psyr_3059	0.61	-1.8
3,658,292	+		Psyr_3059	0.61	-0.8
3,658,292	+		Psyr_3059	0.61	+3.5
3,658,292	+		Psyr_3059	0.61	+2.3
3,658,292	+		Psyr_3059	0.61	+2.3
3,658,292	+		Psyr_3059	0.61	-1.8
3,658,293	-		Psyr_3059	0.61	+3.0
3,658,293	-		Psyr_3059	0.61	+0.7
3,658,293	-		Psyr_3059	0.61	+1.7
3,658,293	-		Psyr_3059	0.61	+0.8
3,658,293	-		Psyr_3059	0.61	+3.6
3,658,345	+		Psyr_3059	0.64	+2.0
3,658,345	+		Psyr_3059	0.64	-2.5
3,658,345	+		Psyr_3059	0.64	-4.0
3,658,346	-		Psyr_3059	0.64	+3.5
3,658,357	+		Psyr_3059	0.65	-1.6
3,658,357	+		Psyr_3059	0.65	+0.7
3,658,358	-		Psyr_3059	0.65	+1.7
3,658,358	-		Psyr_3059	0.65	-2.2
3,658,358	-		Psyr_3059	0.65	+2.5
3,658,358	-		Psyr_3059	0.65	+1.7
3,658,372	+		Psyr_3059	0.66	+0.3
3,658,372	+		Psyr_3059	0.66	+1.3
3,658,414	+		Psyr_3059	0.68	-2.3
3,658,415	-		Psyr_3059	0.68	-0.9
3,658,480	+		Psyr_3059	0.72	+3.3
3,658,481	-				-0.3
3,658,481	-		Psyr_3059	0.72	+1.7
3,658,632	-		Psyr_3059	0.82	+2.0
3,658,762	+		Psyr_3059	0.90	-2.1
3,658,762	+		Psyr_3059	0.90	+1.7
3,658,763	-		Psyr_3059	0.90	-1.0
3,658,763	-		Psyr_3059	0.90	+4.1
3,658,763	-		Psyr_3059	0.90	-2.0
3,658,801	+				+3.6
3,658,802	-				+0.2
3,658,802	-				+1.7
3,658,945	+				+2.5
3,658,955	-				-0.9
3,659,032	-				+0.3
3,659,131	+				-2.2
3,659,148	-				-0.9
3,659,149	+				+2.9
3,659,149	+				-1.6
3,659,175	+				-0.3
3,659,299	+				-0.3
3,659,300	-				-1.7
3,659,300	-				+3.5
3,659,300	-				-1.2
3,659,308	+				-0.3
3,659,308	+				-0.4
3,659,309	-				+0.8
3,659,309	-				-1.7
3,659,309	-				+2.5
3,659,326	-				+0.7
3,659,334	+				-3.4
3,659,335	-				+0.2
3,659,344	-				-4.4
3,659,344	-				-0.6
3,659,344	-				+2.0
3,659,344	-				-1.6
3,659,344	-				+4.4
3,659,350	+				-1.0
3,659,350	+				+2.5
3,659,350	+				-1.7
3,659,351	-				-0.3
3,659,351	-				-4.7
3,659,351	-				-0.3
3,659,351	-				-0.5
3,659,446	+				+3.4
3,659,709	+		Psyr_3060	0.25	-0.1
3,659,709	+		Psyr_3060	0.25	-0.4
3,659,710	-		Psyr_3060	0.25	+0.3
3,659,710	-		Psyr_3060	0.25	-0.6
3,659,710	-		Psyr_3060	0.25	-0.3
3,659,710	-		Psyr_3060	0.25	-0.9
3,659,710	-				-0.3
3,659,710	-		Psyr_3060	0.25	-2.4
3,659,721	+		Psyr_3060	0.26	-2.2
3,659,742	-		Psyr_3060	0.28	+2.9
3,659,784	-		Psyr_3060	0.31	+0.7