Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2967

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,555,458	+		Psyr_2966	0.69	+3.7
3,555,459	-		Psyr_2966	0.69	-1.0
3,555,491	+		Psyr_2966	0.70	-0.0
3,555,492	-		Psyr_2966	0.70	-1.1
3,555,492	-		Psyr_2966	0.70	-1.6
3,555,492	-		Psyr_2966	0.70	+3.1
3,555,492	-		Psyr_2966	0.70	+2.1
3,555,493	+		Psyr_2966	0.70	+2.6
3,555,493	+		Psyr_2966	0.70	+2.4
3,555,830	-		Psyr_2966	0.88	+1.8
3,555,865	+		Psyr_2966	0.90	-0.2
3,555,865	+		Psyr_2966	0.90	-0.3
3,555,866	-		Psyr_2966	0.90	+0.1
3,555,956	+				-2.3
3,556,014	+				+3.6
3,556,014	+				+1.0
3,556,015	-				-2.0
3,556,015	-				+3.1
3,556,122	+				-2.7
3,556,122	+				-1.6
3,556,122	+				-2.8
3,556,123	-				+2.1
3,556,123	-				+2.1
3,556,123	-				-1.2
3,556,126	-				-1.2
3,556,159	+				-0.4
3,556,165	+				-0.7
3,556,217	+				+1.4
3,556,218	-				+1.4
3,556,270	+				-0.2
3,556,270	+				-3.1
3,556,270	+				+2.4
3,556,271	-				+1.4
3,556,271	-				-1.7
3,556,271	-				+3.0
3,556,272	+				+1.4
3,556,273	-				-0.8
3,556,273	-				+0.6
3,556,277	-				-3.5
3,556,326	-				-1.9
3,556,409	-				+3.3
3,556,813	-		Psyr_2967	0.35	+2.1
3,557,009	-		Psyr_2967	0.51	+3.6
3,557,014	+		Psyr_2967	0.51	+0.8
3,557,014	+		Psyr_2967	0.51	+0.4
3,557,015	-		Psyr_2967	0.51	-1.5
3,557,015	-		Psyr_2967	0.51	-4.5
3,557,015	-		Psyr_2967	0.51	-1.1
3,557,015	-		Psyr_2967	0.51	+2.4
3,557,015	-		Psyr_2967	0.51	-1.0
3,557,015	-		Psyr_2967	0.51	-2.8
3,557,048	-		Psyr_2967	0.54	-0.2
3,557,048	-		Psyr_2967	0.54	+2.4
3,557,095	+		Psyr_2967	0.57	-1.5
3,557,096	-		Psyr_2967	0.58	+3.7
3,557,237	-		Psyr_2967	0.69	+0.2
3,557,269	+		Psyr_2967	0.71	+3.4
3,557,270	-		Psyr_2967	0.72	-1.2
3,557,270	-		Psyr_2967	0.72	+4.1
3,557,270	-		Psyr_2967	0.72	+3.2
3,557,655	+				+2.1
3,557,656	-				+3.6
3,557,869	+				-1.3
3,557,869	+				+3.0
3,557,869	+				+3.4
3,557,869	+				-2.9
3,557,869	+				+2.4
3,557,869	+				+3.3
3,557,869	+				-2.1
3,557,869	+				-2.2
3,557,869	+				-1.3
3,557,869	+				+2.6
3,557,869	+				-1.9
3,557,870	-				+2.8
3,557,870	-				+2.8
3,557,870	-				+2.5
3,557,870	-				-1.9
3,557,870	-				+2.8
3,557,870	-				-1.3
3,558,097	+		Psyr_2968	0.14	-0.5
3,558,098	-		Psyr_2968	0.15	-0.9
3,558,109	+		Psyr_2968	0.15	-2.5
3,558,109	+		Psyr_2968	0.15	+2.4
3,558,110	-		Psyr_2968	0.15	+3.0
3,558,188	-		Psyr_2968	0.17	+1.4
3,558,560	+		Psyr_2968	0.29	+2.8
3,558,561	-		Psyr_2968	0.29	+4.0
3,558,561	-		Psyr_2968	0.29	-0.2
3,558,561	-		Psyr_2968	0.29	-1.9
3,558,610	+		Psyr_2968	0.31	+3.0