Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2963

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,551,000	+				-1.6
3,551,001	-				-1.1
3,551,028	-				-1.8
3,551,028	-				+3.1
3,551,028	-				+1.1
3,551,170	+		Psyr_2962	0.18	+0.1
3,551,170	+		Psyr_2962	0.18	+2.1
3,551,171	-		Psyr_2962	0.18	-1.0
3,551,171	-		Psyr_2962	0.18	+3.5
3,551,171	-		Psyr_2962	0.18	+3.1
3,551,171	-		Psyr_2962	0.18	-2.8
3,551,171	-		Psyr_2962	0.18	-2.4
3,551,171	-		Psyr_2962	0.18	+2.6
3,551,213	+		Psyr_2962	0.22	-0.6
3,551,263	-		Psyr_2962	0.28	+3.3
3,551,603	-		Psyr_2962	0.67	+2.4
3,551,603	-		Psyr_2962	0.67	+3.5
3,551,603	-		Psyr_2962	0.67	-0.4
3,551,825	-				+0.8
3,551,830	+				+3.5
3,551,918	-				-1.9
3,552,127	+		Psyr_2963	0.27	-0.1
3,552,127	+		Psyr_2963	0.27	+2.1
3,552,127	+		Psyr_2963	0.27	+3.9
3,552,127	+		Psyr_2963	0.27	+0.3
3,552,128	-		Psyr_2963	0.27	+0.6
3,552,128	-		Psyr_2963	0.27	-0.2
3,552,128	-		Psyr_2963	0.27	-2.9
3,552,128	-		Psyr_2963	0.27	+1.4
3,552,128	-		Psyr_2963	0.27	-1.0
3,552,128	-		Psyr_2963	0.27	+0.8
3,552,128	-		Psyr_2963	0.27	+2.1
3,552,128	-		Psyr_2963	0.27	+0.8
3,552,173	-		Psyr_2963	0.33	-0.8
3,552,541	+		Psyr_2963	0.88	+1.3
3,552,541	+		Psyr_2963	0.88	-0.2
3,552,541	+		Psyr_2963	0.88	-0.7
3,552,541	+		Psyr_2963	0.88	-0.2
3,552,541	+		Psyr_2963	0.88	-0.1
3,552,542	-		Psyr_2963	0.88	-0.1
3,552,542	-		Psyr_2963	0.88	+2.4
3,552,771	-		Psyr_2964	0.22	+2.6
3,552,800	-		Psyr_2964	0.26	+0.8
3,552,841	+		Psyr_2964	0.33	+2.1
3,552,841	+		Psyr_2964	0.33	-3.0
3,552,841	+		Psyr_2964	0.33	-0.2
3,552,841	+		Psyr_2964	0.33	-1.9
3,552,841	+		Psyr_2964	0.33	-1.1
3,552,841	+		Psyr_2964	0.33	+1.4
3,552,841	+		Psyr_2964	0.33	-3.2
3,552,842	-		Psyr_2964	0.33	+3.0
3,552,842	-		Psyr_2964	0.33	-0.4
3,552,842	-		Psyr_2964	0.33	-2.4
3,552,842	-		Psyr_2964	0.33	-2.1
3,552,842	-		Psyr_2964	0.33	-1.5
3,552,842	-		Psyr_2964	0.33	-1.2
3,552,842	-		Psyr_2964	0.33	+1.8
3,552,842	-		Psyr_2964	0.33	-0.6
3,552,842	-		Psyr_2964	0.33	+2.0
3,552,845	+		Psyr_2964	0.33	+0.8
3,552,845	+		Psyr_2964	0.33	+1.8
3,552,845	+		Psyr_2964	0.33	+3.6
3,552,845	+		Psyr_2964	0.33	+3.7
3,552,845	+		Psyr_2964	0.33	-1.6
3,552,846	-		Psyr_2964	0.33	-1.9
3,552,846	-		Psyr_2964	0.33	+4.3
3,552,846	-		Psyr_2964	0.33	-0.3
3,552,846	-		Psyr_2964	0.33	-2.3
3,552,846	-		Psyr_2964	0.33	+0.2
3,552,846	-		Psyr_2964	0.33	+2.4
3,552,846	-		Psyr_2964	0.33	-2.0
3,552,846	-		Psyr_2964	0.33	-0.9
3,552,877	-		Psyr_2964	0.38	+0.8
3,552,920	-		Psyr_2964	0.45	-3.9
3,552,920	-		Psyr_2964	0.45	+3.3
3,552,931	+		Psyr_2964	0.47	+3.0
3,552,931	+		Psyr_2964	0.47	+0.8
3,552,932	-		Psyr_2964	0.47	-2.4
3,552,932	-		Psyr_2964	0.47	+3.0
3,553,125	+		Psyr_2964	0.76	-1.7
3,553,126	-		Psyr_2964	0.76	-3.0
3,553,174	+		Psyr_2964	0.84	-2.7
3,553,174	+		Psyr_2964	0.84	-1.3
3,553,175	-		Psyr_2964	0.84	-1.0
3,553,175	-		Psyr_2964	0.84	-2.3
3,553,192	+		Psyr_2964	0.87	+3.5
3,553,193	-		Psyr_2964	0.87	+1.4
3,553,252	+				+2.4
3,553,320	+				+1.1
3,553,320	+				-3.3
3,553,321	-				-0.7
3,553,321	-				+1.4
3,553,454	-		Psyr_2965	0.23	-2.1
3,553,473	-		Psyr_2965	0.25	+3.5
3,553,488	+		Psyr_2965	0.27	-1.7
3,553,489	-		Psyr_2965	0.27	-1.2
3,553,489	-		Psyr_2965	0.27	-0.1
3,553,489	-		Psyr_2965	0.27	+0.8
3,553,489	-		Psyr_2965	0.27	-4.2
3,553,489	-		Psyr_2965	0.27	+0.8
3,553,489	-		Psyr_2965	0.27	+0.8
3,553,489	-		Psyr_2965	0.27	+0.8
3,553,489	-		Psyr_2965	0.27	+3.5