Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2916

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,503,851	+		Psyr_2915	0.17	+0.8
3,503,852	-		Psyr_2915	0.17	-0.7
3,504,069	+		Psyr_2915	0.40	-1.6
3,504,069	+		Psyr_2915	0.40	-0.0
3,504,070	-		Psyr_2915	0.40	+0.1
3,504,070	-		Psyr_2915	0.40	+0.5
3,504,168	-		Psyr_2915	0.50	-2.1
3,504,572	+				-1.8
3,504,665	+				+2.4
3,504,755	-				-0.2
3,504,884	+				+2.6
3,504,884	+				+2.4
3,504,884	+				+1.4
3,504,884	+				-0.2
3,504,884	+				-1.3
3,504,885	-				-2.0
3,504,885	-				-1.3
3,504,885	-				+1.5
3,504,885	-				+1.8
3,504,930	-		Psyr_2916	0.12	-1.7
3,505,189	+		Psyr_2916	0.39	-1.2
3,505,189	+		Psyr_2916	0.39	-0.5
3,505,189	+		Psyr_2916	0.39	+2.1
3,505,394	+		Psyr_2916	0.61	-2.1
3,505,465	+		Psyr_2916	0.68	+0.5
3,505,465	+		Psyr_2916	0.68	+2.4
3,505,540	+		Psyr_2916	0.76	+2.8
3,505,540	+		Psyr_2916	0.76	+0.6
3,505,540	+		Psyr_2916	0.76	-1.6
3,505,541	-		Psyr_2916	0.76	-1.3
3,505,826	-				+0.2
3,506,050	+		Psyr_2917	0.24	-0.5
3,506,051	-		Psyr_2917	0.24	-0.2
3,506,051	-		Psyr_2917	0.24	+3.3
3,506,257	+		Psyr_2917	0.47	+2.1
3,506,257	+		Psyr_2917	0.47	-0.8
3,506,258	-		Psyr_2917	0.47	-1.7
3,506,258	-		Psyr_2917	0.47	+1.8
3,506,261	+		Psyr_2917	0.48	+1.4
3,506,261	+		Psyr_2917	0.48	-0.5
3,506,261	+		Psyr_2917	0.48	+2.6
3,506,261	+		Psyr_2917	0.48	+3.4
3,506,261	+		Psyr_2917	0.48	-3.4
3,506,261	+		Psyr_2917	0.48	+3.0
3,506,261	+		Psyr_2917	0.48	-1.6
3,506,261	+		Psyr_2917	0.48	+0.8
3,506,261	+		Psyr_2917	0.48	-1.2
3,506,261	+		Psyr_2917	0.48	+3.3
3,506,262	-		Psyr_2917	0.48	+3.4
3,506,262	-		Psyr_2917	0.48	+1.8
3,506,262	-		Psyr_2917	0.48	-0.6
3,506,262	-		Psyr_2917	0.48	-1.2
3,506,262	-		Psyr_2917	0.48	+2.1
3,506,262	-		Psyr_2917	0.48	+3.4
3,506,262	-		Psyr_2917	0.48	-2.2
3,506,262	-		Psyr_2917	0.48	-0.2
3,506,739	+				-1.6
3,506,739	+				-0.5
3,506,739	+				+2.4
3,506,739	+				-2.5
3,506,739	+				-0.4
3,506,739	+				-2.0
3,506,739	+				-3.2
3,506,740	-				-1.3
3,506,740	-				+0.8
3,506,740	-				-0.2