Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2804

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,382,101	+		Psyr_2801	0.89	-1.0
3,382,101	+		Psyr_2801	0.89	+2.5
3,382,102	-				+0.9
3,382,107	+				+0.3
3,382,107	+				-0.5
3,382,107	+				-0.7
3,382,107	+				-0.8
3,382,108	-				-1.2
3,382,130	+				+0.2
3,382,130	+				+2.9
3,382,131	-				-0.6
3,382,147	+				-1.6
3,382,147	+				+2.7
3,382,147	+				+3.1
3,382,147	+				+2.9
3,382,147	+				-0.8
3,382,147	+				-1.2
3,382,147	+				+1.6
3,382,148	-				-2.7
3,382,173	+				-0.1
3,382,174	-				-1.3
3,382,365	+		Psyr_2802	0.53	-2.2
3,382,365	+		Psyr_2802	0.53	-0.3
3,382,366	-		Psyr_2802	0.53	+2.2
3,382,388	-		Psyr_2802	0.60	-0.8
3,382,388	-		Psyr_2802	0.60	+2.2
3,382,473	+		Psyr_2802	0.85	+3.2
3,382,474	-		Psyr_2802	0.85	-3.1
3,382,508	+				+0.2
3,382,509	-				-2.4
3,382,509	-				+0.3
3,382,861	+				-0.3
3,382,861	+				+1.5
3,382,910	-				-0.7
3,382,951	+				+3.1
3,382,951	+				-0.1
3,382,951	+				+1.5
3,382,952	-				+4.3
3,382,955	+				-0.1
3,382,989	+				-1.4
3,382,990	-				+2.2
3,382,990	-				+2.7
3,382,990	-				+1.9
3,383,012	+				+1.5
3,383,041	+				-1.3
3,383,041	+				-0.9
3,383,042	-				-2.5
3,383,042	-				+0.7
3,383,128	+		Psyr_2804	0.18	-2.9
3,383,200	-		Psyr_2804	0.38	-3.9
3,383,200	-		Psyr_2804	0.38	+0.9
3,383,266	+		Psyr_2804	0.57	+1.9
3,383,283	-		Psyr_2804	0.61	-2.7
3,383,319	-		Psyr_2804	0.71	+1.9
3,383,319	-		Psyr_2804	0.71	-0.1
3,383,330	-		Psyr_2804	0.75	+1.5
3,383,400	-				-0.4
3,383,442	+				+0.0
3,383,561	-				-0.0
3,383,561	-				+1.5
3,383,568	+				+1.5
3,383,769	+		Psyr_2805	0.38	-1.8
3,383,769	+		Psyr_2805	0.38	+1.9
3,383,769	+		Psyr_2805	0.38	-0.1
3,383,769	+		Psyr_2805	0.38	+0.9
3,383,770	-		Psyr_2805	0.38	+0.5
3,383,770	-		Psyr_2805	0.38	-0.8
3,383,770	-		Psyr_2805	0.38	-0.5
3,383,786	+		Psyr_2805	0.41	+1.5
3,383,787	-		Psyr_2805	0.41	+4.2
3,383,802	+		Psyr_2805	0.44	-0.5
3,383,802	+		Psyr_2805	0.44	+0.9
3,383,802	+		Psyr_2805	0.44	+3.4
3,383,851	+		Psyr_2805	0.52	+3.6
3,383,851	+		Psyr_2805	0.52	+2.2
3,383,852	-		Psyr_2805	0.53	+1.8
3,383,852	-		Psyr_2805	0.53	-0.7
3,383,852	-		Psyr_2805	0.53	+3.4
3,383,852	-		Psyr_2805	0.53	-0.4
3,383,852	-		Psyr_2805	0.53	-0.1
3,383,852	-		Psyr_2805	0.53	+3.8
3,383,913	+		Psyr_2805	0.63	-1.2
3,383,913	+		Psyr_2805	0.63	-0.6
3,383,913	+		Psyr_2805	0.63	+3.2
3,383,913	+		Psyr_2805	0.63	-2.3
3,383,913	+		Psyr_2805	0.63	-1.4
3,383,914	-		Psyr_2805	0.63	+0.3
3,383,914	-		Psyr_2805	0.63	+1.5
3,383,914	-		Psyr_2805	0.63	-0.4
3,383,914	-		Psyr_2805	0.63	+1.5
3,383,914	-		Psyr_2805	0.63	-0.7
3,383,914	-		Psyr_2805	0.63	+2.7
3,383,914	-		Psyr_2805	0.63	-0.5
3,383,914	-		Psyr_2805	0.63	-2.8
3,383,919	+		Psyr_2805	0.64	-2.4
3,383,919	+		Psyr_2805	0.64	-0.4
3,383,919	+		Psyr_2805	0.64	+3.8
3,383,919	+				-0.1
3,383,919	+		Psyr_2805	0.64	-1.0
3,383,919	+		Psyr_2805	0.64	+2.9
3,383,920	-		Psyr_2805	0.64	+3.4
3,383,920	-		Psyr_2805	0.64	+0.1
3,383,920	-		Psyr_2805	0.64	-2.4
3,383,920	-		Psyr_2805	0.64	-0.3
3,383,936	+		Psyr_2805	0.67	-0.1
3,383,936	+		Psyr_2805	0.67	-0.1
3,383,936	+		Psyr_2805	0.67	-2.8
3,383,989	+		Psyr_2805	0.76	-3.0
3,384,084	+				-0.7
3,384,084	+				+1.9
3,384,084	+				-2.9
3,384,084	+				+2.2
3,384,085	-				+1.7
3,384,085	-				-0.1
3,384,168	-				-2.1
3,384,203	+		Psyr_2806	0.14	-1.1
3,384,203	+		Psyr_2806	0.14	+2.9
3,384,204	-		Psyr_2806	0.14	+4.0
3,384,204	-		Psyr_2806	0.14	-0.1
3,384,204	-		Psyr_2806	0.14	-0.7
3,384,331	+		Psyr_2806	0.35	+3.1
3,384,331	+		Psyr_2806	0.35	-0.1
3,384,332	-		Psyr_2806	0.36	+2.2
3,384,332	-		Psyr_2806	0.36	+1.5
3,384,332	-		Psyr_2806	0.36	+0.9
3,384,381	-		Psyr_2806	0.44	-1.0