Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2749

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,336,308	+		Psyr_2748	0.16	+3.1
3,336,309	-		Psyr_2748	0.17	-1.0
3,336,309	-		Psyr_2748	0.17	+4.3
3,336,309	-		Psyr_2748	0.17	-0.7
3,336,362	+		Psyr_2748	0.21	-0.2
3,336,363	-		Psyr_2748	0.21	-3.4
3,336,363	-		Psyr_2748	0.21	-3.6
3,336,363	-		Psyr_2748	0.21	+2.5
3,336,363	-		Psyr_2748	0.21	-1.8
3,336,363	-		Psyr_2748	0.21	+0.1
3,336,525	+		Psyr_2748	0.35	+2.4
3,336,548	+		Psyr_2748	0.37	+2.5
3,336,549	-		Psyr_2748	0.37	+1.9
3,336,549	-		Psyr_2748	0.37	+1.9
3,336,549	-		Psyr_2748	0.37	+3.3
3,336,951	-		Psyr_2748	0.72	+2.2
3,337,035	-		Psyr_2748	0.79	-1.4
3,337,077	-		Psyr_2748	0.83	+2.5
3,337,112	+		Psyr_2748	0.86	-2.1
3,337,112	+		Psyr_2748	0.86	+3.5
3,337,113	-		Psyr_2748	0.86	-0.1
3,337,113	-		Psyr_2748	0.86	+3.1
3,337,113	-		Psyr_2748	0.86	+1.9
3,337,252	+				+2.7
3,337,259	+				+3.3
3,337,267	-				+2.5
3,337,727	-		Psyr_2749	0.29	-4.7
3,337,727	-		Psyr_2749	0.29	+3.1
3,337,727	-		Psyr_2749	0.29	+1.5
3,337,999	+		Psyr_2749	0.47	+0.9
3,337,999	+		Psyr_2749	0.47	-0.3
3,338,021	-		Psyr_2749	0.49	+1.5
3,338,021	-		Psyr_2749	0.49	-1.0
3,338,351	-		Psyr_2749	0.71	-2.4
3,338,351	-		Psyr_2749	0.71	+0.3
3,338,351	-		Psyr_2749	0.71	+1.5
3,338,526	+		Psyr_2749	0.83	-1.0
3,338,526	+		Psyr_2749	0.83	+2.7
3,338,526	+		Psyr_2749	0.83	-0.8
3,338,526	+		Psyr_2749	0.83	-1.4
3,338,526	+		Psyr_2749	0.83	+0.3
3,338,527	-		Psyr_2749	0.83	+2.7
3,338,527	-		Psyr_2749	0.83	+2.7
3,338,527	-		Psyr_2749	0.83	+2.5
3,338,527	-		Psyr_2749	0.83	+0.9
3,338,623	+		Psyr_2749	0.89	-1.2
3,338,623	+		Psyr_2749	0.89	+2.2
3,338,623	+		Psyr_2749	0.89	+3.4
3,338,623	+		Psyr_2749	0.89	-1.0
3,338,623	+		Psyr_2749	0.89	-0.1
3,338,624	-		Psyr_2749	0.89	+2.2
3,338,624	-		Psyr_2749	0.89	-0.6
3,338,624	-		Psyr_2749	0.89	+0.9
3,338,624	-		Psyr_2749	0.89	+2.2
3,338,624	-		Psyr_2749	0.89	-0.7
3,338,624	-		Psyr_2749	0.89	-0.1
3,338,624	-		Psyr_2749	0.89	-0.3
3,338,624	-		Psyr_2749	0.89	-0.3
3,338,645	-				+1.5
3,338,730	+				-0.6
3,338,730	+				+2.5
3,338,730	+				-0.3
3,338,731	-				+2.2
3,338,731	-				-0.9
3,338,731	-				-1.2
3,338,780	+				-0.7
3,338,781	-				+3.6
3,338,781	-				-4.3
3,338,781	-				+0.0
3,338,834	+		Psyr_2750	0.14	-1.5
3,338,835	-		Psyr_2750	0.14	+0.9
3,338,835	-		Psyr_2750	0.14	-0.1
3,338,835	-		Psyr_2750	0.14	+2.5
3,338,835	-		Psyr_2750	0.14	-1.7
3,338,835	-		Psyr_2750	0.14	+0.2
3,338,835	-		Psyr_2750	0.14	-2.0
3,338,835	-		Psyr_2750	0.14	+2.5
3,338,858	+		Psyr_2750	0.20	+4.1
3,338,858	+		Psyr_2750	0.20	-2.4
3,338,858	+		Psyr_2750	0.20	-1.3
3,338,858	+		Psyr_2750	0.20	+3.8
3,338,858	+		Psyr_2750	0.20	-0.1
3,338,858	+		Psyr_2750	0.20	+1.9
3,338,858	+		Psyr_2750	0.20	+4.0
3,338,859	-		Psyr_2750	0.20	-1.4
3,338,859	-		Psyr_2750	0.20	+2.7
3,338,859	-		Psyr_2750	0.20	+1.9
3,338,859	-		Psyr_2750	0.20	-1.6
3,338,894	+		Psyr_2750	0.29	-0.5
3,338,894	+		Psyr_2750	0.29	-4.2
3,338,894	+		Psyr_2750	0.29	+0.1
3,338,894	+		Psyr_2750	0.29	-2.1
3,338,895	-		Psyr_2750	0.30	-1.2
3,338,895	-		Psyr_2750	0.30	+3.8
3,338,895	-		Psyr_2750	0.30	+3.1
3,338,895	-		Psyr_2750	0.30	-1.9
3,339,124	+		Psyr_2750	0.88	-0.1
3,339,148	-				-0.1
3,339,154	+				-0.4
3,339,154	+				-1.5
3,339,154	+				+2.7
3,339,154	+				-0.3
3,339,154	+				-1.2
3,339,154	+				+1.9
3,339,154	+				+2.5
3,339,154	+				+0.2
3,339,154	+				-1.6
3,339,155	-				+1.5
3,339,155	-				+1.5
3,339,155	-				-3.3
3,339,155	-				-2.6
3,339,155	-				+2.2
3,339,155	-				-0.1
3,339,155	-				-0.7
3,339,155	-				+2.9
3,339,155	-				+2.5
3,339,261	-				-0.1
3,339,261	-				-0.1
3,339,304	-				-2.0
3,339,304	-				-1.3
3,339,304	-				+3.2
3,339,341	-				-4.0
3,339,365	-				-2.1
3,339,460	-				-1.6
3,339,469	-				+0.1
3,339,713	+		Psyr_2751	0.22	-0.7
3,339,713	+		Psyr_2751	0.22	-0.5
3,339,713	+		Psyr_2751	0.22	+0.4
3,339,714	-		Psyr_2751	0.22	+3.2
3,339,714	-		Psyr_2751	0.22	+1.5
3,339,714	-		Psyr_2751	0.22	-0.4
3,339,714	-		Psyr_2751	0.22	+3.7
3,339,747	+		Psyr_2751	0.25	-3.9