Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2728

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,310,655	+		Psyr_2727	0.43	-3.2
3,310,655	+		Psyr_2727	0.43	+2.5
3,310,656	-		Psyr_2727	0.43	+2.5
3,310,656	-		Psyr_2727	0.43	+3.5
3,310,656	-		Psyr_2727	0.43	+2.2
3,310,789	+		Psyr_2727	0.52	+3.7
3,310,790	-		Psyr_2727	0.52	-3.2
3,310,790	-		Psyr_2727	0.52	-0.2
3,311,182	+		Psyr_2727	0.79	+2.7
3,311,182	+		Psyr_2727	0.79	-3.5
3,311,182	+		Psyr_2727	0.79	-1.6
3,311,182	+		Psyr_2727	0.79	-0.3
3,311,182	+		Psyr_2727	0.79	+0.2
3,311,182	+		Psyr_2727	0.79	+3.7
3,311,182	+		Psyr_2727	0.79	+2.7
3,311,183	-		Psyr_2727	0.79	+3.9
3,311,183	-		Psyr_2727	0.79	+3.6
3,311,427	+				-1.1
3,311,427	+				+1.9
3,311,427	+				+1.1
3,311,428	-				-0.6
3,311,428	-				+1.5
3,311,428	-				-0.7
3,311,499	-				-1.5
3,311,501	+				+1.9
3,311,501	+				+2.5
3,311,502	-				-1.4
3,311,502	-				+0.8
3,311,502	-				+2.2
3,311,502	-				+2.3
3,311,502	-				+0.9
3,311,517	+				+0.1
3,311,517	+				+3.1
3,311,517	+				+2.9
3,311,518	-				+3.6
3,311,518	-				-0.7
3,311,532	-				+1.5
3,311,559	+				+1.5
3,311,561	+				+3.2
3,311,561	+				+1.5
3,311,562	-				+3.2
3,311,672	+		Psyr_2728	0.15	+3.2
3,311,764	-		Psyr_2728	0.26	-1.3
3,311,873	+		Psyr_2728	0.39	+4.0
3,311,873	+		Psyr_2728	0.39	-1.0
3,311,873	+		Psyr_2728	0.39	-0.3
3,311,873	+		Psyr_2728	0.39	-0.1
3,311,873	+		Psyr_2728	0.39	-0.8
3,311,873	+		Psyr_2728	0.39	-0.5
3,311,874	-		Psyr_2728	0.39	+3.1
3,311,874	-		Psyr_2728	0.39	-0.4
3,311,874	-		Psyr_2728	0.39	+3.1
3,311,874	-		Psyr_2728	0.39	-3.4
3,311,874	-		Psyr_2728	0.39	+2.7
3,311,874	-		Psyr_2728	0.39	-2.0
3,311,874	-		Psyr_2728	0.39	+3.9
3,311,874	-		Psyr_2728	0.39	+3.8
3,311,874	-		Psyr_2728	0.39	+3.1
3,311,874	-		Psyr_2728	0.39	-0.1
3,311,876	+		Psyr_2728	0.39	+3.2
3,311,876	+		Psyr_2728	0.39	+1.5
3,311,877	-		Psyr_2728	0.39	-0.4
3,312,069	-		Psyr_2728	0.62	+2.9
3,312,076	+		Psyr_2728	0.63	-0.7
3,312,159	-		Psyr_2728	0.73	+3.5
3,312,327	+				+1.9
3,312,328	-				+2.2
3,312,328	-				+1.9
3,312,328	-				-2.6
3,312,371	+				+1.1
3,312,371	+				+1.9
3,312,371	+				-1.4
3,312,371	+				-1.1
3,312,372	-				+3.5
3,312,372	-				+1.2
3,312,372	-				+4.3
3,312,372	-				-1.1
3,312,372	-				-1.6
3,312,423	+				-2.0
3,312,424	-				-0.8
3,312,424	-				+0.9
3,312,512	+				+2.7
3,312,512	+				-0.1
3,312,512	+				-0.4
3,312,513	-				+2.9
3,312,513	-				+3.2
3,312,513	-				+2.9
3,312,513	-				-0.2
3,312,513	-				-1.4
3,312,521	+				+3.6
3,312,521	+				+2.9
3,312,521	+				+4.2
3,312,521	+				+3.5
3,312,521	-				+1.9
3,312,522	-				+1.9
3,312,525	+				+1.9
3,312,525	+				+0.3
3,312,526	-				-2.9
3,313,071	-				+2.2
3,313,071	-				-0.8
3,313,071	-				+0.1
3,313,130	+				-0.5
3,313,130	+				-0.1
3,313,130	+				-2.4
3,313,130	+				-0.6
3,313,131	-				-1.0
3,313,131	-				-4.0
3,313,131	-				-1.4
3,313,131	-				-1.6
3,313,196	+				-1.4
3,313,196	+				+2.5
3,313,197	-				+3.1
3,313,254	-		Psyr_2730	0.11	+0.0
3,313,334	+		Psyr_2730	0.17	-1.8
3,313,334	+		Psyr_2730	0.17	+0.9
3,313,335	-		Psyr_2730	0.17	+2.5