Experiment: KB with Benzalkonium Chloride 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2693 and Psyr_2694 are separated by 8 nucleotides Psyr_2694 and Psyr_2695 overlap by 4 nucleotides Psyr_2695 and Psyr_2696 overlap by 23 nucleotides
Psyr_2693: Psyr_2693 - Glycosyl transferase, family 39, at 3,270,050 to 3,271,702
_2693
Psyr_2694: Psyr_2694 - conserved hypothetical protein, at 3,271,711 to 3,272,037
_2694
Psyr_2695: Psyr_2695 - conserved hypothetical protein, at 3,272,034 to 3,272,468
_2695
Psyr_2696: Psyr_2696 - UDP-glucose 6-dehydrogenase, at 3,272,446 to 3,273,840
_2696
Position (kb)
3272
3273 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 3271.139 kb on + strand, within Psyr_2693 at 3271.487 kb on + strand, within Psyr_2693 at 3271.652 kb on + strand at 3271.763 kb on - strand, within Psyr_2694 at 3271.769 kb on + strand, within Psyr_2694 at 3271.769 kb on + strand, within Psyr_2694 at 3271.860 kb on - strand, within Psyr_2694 at 3271.949 kb on - strand, within Psyr_2694 at 3271.974 kb on - strand, within Psyr_2694 at 3272.013 kb on - strand at 3272.013 kb on - strand at 3272.275 kb on - strand, within Psyr_2695 at 3272.275 kb on - strand, within Psyr_2695 at 3272.289 kb on - strand, within Psyr_2695 at 3272.289 kb on - strand, within Psyr_2695 at 3272.295 kb on + strand, within Psyr_2695 at 3272.295 kb on + strand, within Psyr_2695 at 3272.308 kb on - strand, within Psyr_2695 at 3272.309 kb on + strand, within Psyr_2695 at 3272.486 kb on + strand at 3272.487 kb on - strand at 3272.580 kb on + strand at 3272.580 kb on + strand at 3272.581 kb on - strand at 3272.581 kb on - strand at 3272.581 kb on - strand at 3272.584 kb on + strand at 3272.584 kb on + strand at 3272.584 kb on + strand at 3272.584 kb on + strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.585 kb on - strand at 3272.955 kb on + strand, within Psyr_2696 at 3272.956 kb on - strand, within Psyr_2696 at 3273.007 kb on + strand, within Psyr_2696 at 3273.007 kb on + strand, within Psyr_2696 at 3273.008 kb on - strand, within Psyr_2696 at 3273.076 kb on + strand, within Psyr_2696 at 3273.374 kb on - strand, within Psyr_2696
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Benzalkonium Chloride 6.25 ug/ml remove 3,271,139 + Psyr_2693 0.66 +3.6 3,271,487 + Psyr_2693 0.87 -0.7 3,271,652 + -3.6 3,271,763 - Psyr_2694 0.16 -1.9 3,271,769 + Psyr_2694 0.18 -0.1 3,271,769 + Psyr_2694 0.18 +2.9 3,271,860 - Psyr_2694 0.46 +2.5 3,271,949 - Psyr_2694 0.73 -0.9 3,271,974 - Psyr_2694 0.80 -1.7 3,272,013 - -1.5 3,272,013 - +1.9 3,272,275 - Psyr_2695 0.55 +2.9 3,272,275 - Psyr_2695 0.55 -1.6 3,272,289 - Psyr_2695 0.59 -2.4 3,272,289 - Psyr_2695 0.59 -0.1 3,272,295 + Psyr_2695 0.60 +2.9 3,272,295 + Psyr_2695 0.60 -1.4 3,272,308 - Psyr_2695 0.63 +2.7 3,272,309 + Psyr_2695 0.63 -3.8 3,272,486 + -0.2 3,272,487 - +3.7 3,272,580 + +1.5 3,272,580 + +1.9 3,272,581 - -0.9 3,272,581 - -0.1 3,272,581 - +0.9 3,272,584 + +2.9 3,272,584 + -2.0 3,272,584 + +3.5 3,272,584 + +3.9 3,272,585 - +1.5 3,272,585 - -1.4 3,272,585 - -0.1 3,272,585 - -0.1 3,272,585 - -0.9 3,272,585 - +0.5 3,272,585 - +3.2 3,272,955 + Psyr_2696 0.36 +0.9 3,272,956 - Psyr_2696 0.37 -0.1 3,273,007 + Psyr_2696 0.40 -4.0 3,273,007 + Psyr_2696 0.40 +3.8 3,273,008 - Psyr_2696 0.40 -0.1 3,273,076 + Psyr_2696 0.45 -2.4 3,273,374 - Psyr_2696 0.67 +2.2
Or see this region's nucleotide sequence