Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2669

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,239,688	+				+1.9
3,239,715	+				-0.1
3,239,715	+				+1.5
3,239,715	+				-2.9
3,239,715	+				-2.2
3,239,715	+				+3.3
3,239,715	+				+3.0
3,239,715	+				-0.6
3,239,716	-				-0.3
3,239,716	-				+2.5
3,239,716	-				-0.3
3,239,716	-				+1.9
3,239,716	-				+3.0
3,239,716	-				-1.6
3,239,717	+				+0.2
3,239,718	-				-1.7
3,239,782	+				-0.6
3,239,783	-				-1.6
3,239,802	+				-0.3
3,239,802	+				-0.7
3,239,803	-				-0.1
3,239,803	-				+0.7
3,239,865	+				+3.0
3,239,925	+				+1.1
3,239,925	+				+4.0
3,240,026	+		Psyr_2668	0.16	-1.1
3,240,027	-		Psyr_2668	0.16	-1.6
3,240,027	-		Psyr_2668	0.16	-3.9
3,240,030	+		Psyr_2668	0.17	-2.8
3,240,030	+		Psyr_2668	0.17	-0.1
3,240,030	+		Psyr_2668	0.17	+3.5
3,240,030	+		Psyr_2668	0.17	-0.4
3,240,030	+		Psyr_2668	0.17	-0.3
3,240,030	+		Psyr_2668	0.17	-0.9
3,240,031	-		Psyr_2668	0.17	-1.8
3,240,536	+				+1.5
3,240,536	+				+2.2
3,240,536	+				+0.9
3,240,536	+				+3.5
3,240,537	-				+2.2
3,240,537	-				-1.1
3,240,537	-				+3.9
3,240,540	+				+2.5
3,240,540	+				-1.2
3,240,540	+				-1.1
3,240,540	+				+1.5
3,240,540	+				-0.3
3,240,620	-				+0.9
3,241,067	-		Psyr_2669	0.57	-3.5
3,241,139	-		Psyr_2669	0.66	-1.9
3,241,189	+		Psyr_2669	0.72	+0.9
3,241,247	+				-0.1
3,241,248	-		Psyr_2669	0.80	-1.2
3,241,329	+		Psyr_2669	0.90	+2.5
3,241,329	+		Psyr_2669	0.90	-2.7
3,241,330	-		Psyr_2669	0.90	-1.2
3,241,330	-		Psyr_2669	0.90	+3.2
3,241,338	+				+2.9
3,241,338	+				-0.1
3,241,338	+				+1.5
3,241,339	-				-0.1
3,241,339	-				+4.0
3,241,339	-				-0.4
3,241,339	-				-0.5
3,241,339	-				-2.6
3,241,379	+				+3.9
3,241,379	+				+2.7
3,241,379	+				+1.9
3,241,545	+		Psyr_2670	0.15	-0.1
3,241,545	+		Psyr_2670	0.15	-0.3
3,241,545	+		Psyr_2670	0.15	-3.8
3,241,546	-		Psyr_2670	0.16	-0.5
3,241,546	-		Psyr_2670	0.16	-0.2
3,241,546	-				-0.1
3,241,546	-		Psyr_2670	0.16	+3.6
3,241,546	-		Psyr_2670	0.16	-2.7
3,241,547	+		Psyr_2670	0.16	-2.5
3,241,547	+		Psyr_2670	0.16	-2.1
3,241,548	-		Psyr_2670	0.16	-0.9
3,241,548	-		Psyr_2670	0.16	-1.3
3,241,548	-		Psyr_2670	0.16	+0.0
3,241,548	-		Psyr_2670	0.16	+0.9
3,241,583	-		Psyr_2670	0.20	+0.3
3,241,589	+		Psyr_2670	0.21	-2.1
3,241,590	-		Psyr_2670	0.21	-2.2
3,241,654	+		Psyr_2670	0.29	+3.2
3,241,744	+		Psyr_2670	0.39	+2.2
3,241,744	+		Psyr_2670	0.39	-0.9
3,241,856	-		Psyr_2670	0.53	+3.0
3,241,856	-		Psyr_2670	0.53	-0.7
3,241,856	-		Psyr_2670	0.53	-4.5
3,241,872	+		Psyr_2670	0.55	+0.9
3,241,875	-		Psyr_2670	0.55	-0.5
3,241,875	-		Psyr_2670	0.55	-1.1
3,241,916	+		Psyr_2670	0.60	-1.8
3,241,973	+		Psyr_2670	0.67	-1.9
3,241,973	+		Psyr_2670	0.67	-0.8
3,241,973	+		Psyr_2670	0.67	+0.4
3,241,974	-		Psyr_2670	0.67	-3.7
3,242,019	+		Psyr_2670	0.72	-0.6
3,242,019	+		Psyr_2670	0.72	+3.7
3,242,019	+		Psyr_2670	0.72	-0.1
3,242,027	-		Psyr_2670	0.73	-2.0
3,242,201	+				+1.9
3,242,201	+				-0.1
3,242,201	+				+1.5
3,242,201	+				-1.4
3,242,201	+				-0.1
3,242,201	+				-3.1
3,242,201	+				+1.9
3,242,201	+				-2.0
3,242,201	+				-0.1
3,242,202	-				-2.6
3,242,202	-				-2.4
3,242,202	-				-0.1
3,242,202	-				-2.1
3,242,202	-				+3.0
3,242,202	-				+1.9
3,242,202	-				-4.1
3,242,243	-				-1.1
3,242,243	-				-0.8
3,242,245	+				-0.9
3,242,245	+				+2.2
3,242,245	+				-0.1
3,242,245	+				+1.5
3,242,245	+				+1.5
3,242,245	+				-0.1
3,242,245	+				-0.0
3,242,245	+				+2.9
3,242,246	-				-2.5
3,242,246	-				+3.7
3,242,246	-				-3.5
3,242,246	-				+1.9
3,242,246	-				-2.6
3,242,246	-				-1.8
3,242,246	-				-3.4
3,242,246	-				-0.1
3,242,246	-				-1.2
3,242,246	-				+2.5
3,242,246	-				+2.2
3,242,246	-				+1.5
3,242,250	-				+2.7
3,242,267	-				+3.0
3,242,373	-				+1.9
3,242,375	+				-0.1
3,242,376	-				-3.4