Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2598

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
3,044,791	+		Psyr_2597	0.67	+0.3
3,044,792	-		Psyr_2597	0.67	+0.4
3,044,809	+		Psyr_2597	0.68	-0.1
3,044,810	-		Psyr_2597	0.68	-2.1
3,044,810	-		Psyr_2597	0.68	+4.0
3,045,536	+				-0.7
3,045,537	-				+2.7
3,045,537	-				+2.5
3,045,538	+				+1.5
3,045,538	+				+3.2
3,045,538	+				+1.9
3,045,538	+				-2.0
3,045,538	+				+2.2
3,045,538	+				-1.1
3,045,539	-				-0.9
3,045,539	-				-2.1
3,045,539	-				-2.3
3,045,539	-				-0.1
3,045,539	-				+2.2
3,045,539	-				-0.1
3,045,539	-				-0.8
3,045,539	-				+2.9
3,045,539	-				-3.8
3,045,570	+				+1.5
3,045,570	+				-1.1
3,045,570	+				+3.0
3,045,570	+				-0.1
3,045,570	+				-2.0
3,045,570	+				+3.0
3,045,570	+				+1.0
3,045,570	+				+2.5
3,045,570	+				+3.7
3,045,571	-				+1.0
3,045,571	-				-2.4
3,045,571	-				+0.9
3,045,571	-				+2.5
3,045,571	-				-0.9
3,045,571	-				-1.3
3,045,571	-				-0.1
3,045,572	+				-2.5
3,045,572	+				-1.0
3,045,572	+				-1.4
3,045,572	+				+1.9
3,045,594	+				-1.5
3,045,595	-				-2.6
3,045,702	-				-1.3
3,045,714	+				+2.2
3,045,761	+				+3.9
3,045,761	+				-2.1
3,045,803	+				-2.8
3,045,804	-				-4.1
3,045,804	-				-0.8
3,045,868	+				-0.7
3,045,868	+				+0.0
3,045,868	+				+3.2
3,045,935	+				+0.9
3,046,192	+				+2.5
3,046,192	+				-3.4
3,046,192	+				+2.9
3,046,193	-				-0.1
3,046,193	-				+0.1
3,046,654	-		Psyr_2598	0.18	+1.9
3,046,704	+		Psyr_2598	0.18	-1.0
3,046,705	-		Psyr_2598	0.18	+0.2
3,046,752	+		Psyr_2598	0.19	-1.6
3,046,752	+		Psyr_2598	0.19	+0.5
3,046,752	+		Psyr_2598	0.19	+2.2
3,046,752	+		Psyr_2598	0.19	+1.9
3,046,753	-		Psyr_2598	0.19	+2.2
3,046,753	-		Psyr_2598	0.19	-0.8
3,046,889	+		Psyr_2598	0.22	+0.8
3,046,919	+		Psyr_2598	0.22	+0.9
3,046,919	+		Psyr_2598	0.22	-1.0
3,046,920	-		Psyr_2598	0.22	-0.7
3,047,147	-		Psyr_2598	0.26	-0.5
3,047,147	-		Psyr_2598	0.26	+2.7
3,047,187	+		Psyr_2598	0.27	+0.2
3,047,188	-		Psyr_2598	0.27	-0.0
3,047,188	-		Psyr_2598	0.27	+2.5
3,047,247	+		Psyr_2598	0.28	+3.7
3,047,248	-		Psyr_2598	0.28	+2.5
3,047,434	+		Psyr_2598	0.31	+1.9
3,047,434	+		Psyr_2598	0.31	+2.9
3,047,434	+		Psyr_2598	0.31	-2.0
3,047,435	-		Psyr_2598	0.31	+2.5
3,047,435	-		Psyr_2598	0.31	+0.9
3,047,627	+		Psyr_2598	0.34	+0.5
3,047,627	+		Psyr_2598	0.34	-2.6
3,048,015	-		Psyr_2598	0.41	+1.5
3,048,107	-		Psyr_2598	0.42	-2.9
3,048,163	-		Psyr_2598	0.43	+2.9
3,048,321	-		Psyr_2598	0.46	+1.9
3,048,321	-		Psyr_2598	0.46	-2.5
3,048,321	-		Psyr_2598	0.46	-2.0
3,048,467	-		Psyr_2598	0.49	-2.3
3,048,708	+		Psyr_2598	0.53	+2.5
3,048,709	-		Psyr_2598	0.53	+1.5
3,048,709	-		Psyr_2598	0.53	-0.1
3,048,709	-		Psyr_2598	0.53	-1.4
3,049,038	+		Psyr_2598	0.58	-1.8
3,049,038	+		Psyr_2598	0.58	+1.9
3,049,039	-		Psyr_2598	0.58	+1.2
3,049,201	+		Psyr_2598	0.61	+2.2
3,049,201	+		Psyr_2598	0.61	-0.1
3,049,202	-		Psyr_2598	0.61	+1.9
3,049,334	-		Psyr_2598	0.63	+0.9
3,049,334	-		Psyr_2598	0.63	-1.7
3,049,334	-		Psyr_2598	0.63	-3.5
3,049,379	+		Psyr_2598	0.64	+0.9
3,049,729	-		Psyr_2598	0.70	+3.2
3,049,729	-		Psyr_2598	0.70	-0.1
3,049,831	+		Psyr_2598	0.72	+0.9
3,049,831	+		Psyr_2598	0.72	+2.7
3,049,839	+		Psyr_2598	0.72	+2.9
3,049,910	-		Psyr_2598	0.73	-1.1
3,050,393	+		Psyr_2598	0.82	+2.9
3,050,394	-		Psyr_2598	0.82	+2.9
3,050,435	+		Psyr_2598	0.82	-4.1
3,050,585	-		Psyr_2598	0.85	-0.0
3,050,614	-		Psyr_2598	0.85	+0.9
3,050,617	+		Psyr_2598	0.85	-0.1
3,050,617	+		Psyr_2598	0.85	-1.4
3,050,840	+		Psyr_2598	0.89	-1.3
3,050,841	-		Psyr_2598	0.89	-2.7
3,051,063	-				+3.1
3,051,143	+				+1.9
3,051,143	+				+4.2
3,051,144	-				-4.3
3,051,144	-				+1.5
3,051,144	-				-1.9
3,051,211	+				+0.2
3,051,211	+				+3.8
3,051,211	+				-0.1
3,051,211	+				-1.2
3,051,211	+				+0.7
3,051,211	+				-0.0
3,051,212	-				-1.5
3,051,212	-				-1.6
3,051,239	+				+2.9
3,051,240	-				+4.8
3,051,320	+				-1.1
3,051,320	+				+0.5
3,051,320	+				-0.9
3,051,321	-				-1.7
3,051,321	-				-3.8
3,051,344	+				+0.6
3,051,344	+				+3.6
3,051,345	-				+3.3
3,051,345	-				+1.9
3,051,408	+				-1.0
3,051,464	-				-0.3
3,051,584	+				+0.3
3,051,584	+				-3.9
3,051,584	+				-2.2
3,051,584	+				+2.9
3,051,584	+				-0.4
3,051,585	-				-2.8
3,051,608	+		Psyr_2599	0.11	+2.7
3,051,785	-		Psyr_2599	0.26	+3.3
3,051,980	+		Psyr_2599	0.44	+3.8
3,051,980	+		Psyr_2599	0.44	-1.4
3,051,981	-		Psyr_2599	0.44	+1.5
3,051,981	-		Psyr_2599	0.44	+2.5
3,051,981	-		Psyr_2599	0.44	-0.9
3,051,981	-		Psyr_2599	0.44	+2.2
3,051,981	-		Psyr_2599	0.44	+0.9
3,052,295	+		Psyr_2599	0.72	+0.9
3,052,430	+		Psyr_2599	0.84	-0.4
3,052,430	+		Psyr_2599	0.84	+1.9