Experiment: KB with Benzalkonium Chloride 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2524 and Psyr_2525 are separated by 4 nucleotides Psyr_2525 and Psyr_2526 are separated by 4 nucleotides Psyr_2526 and Psyr_2527 are separated by 93 nucleotides
Psyr_2524: Psyr_2524 - conserved hypothetical protein, at 2,934,727 to 2,935,659
_2524
Psyr_2525: Psyr_2525 - Mg2+ transporter protein, CorA-like protein, at 2,935,664 to 2,936,593
_2525
Psyr_2526: Psyr_2526 - Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)-like protein, at 2,936,598 to 2,938,184
_2526
Psyr_2527: Psyr_2527 - GCN5-related N-acetyltransferase, at 2,938,278 to 2,939,426
_2527
Position (kb)
2936
2937
2938
2939 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2935.609 kb on + strand at 2935.609 kb on + strand at 2935.612 kb on - strand at 2935.877 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.927 kb on - strand, within Psyr_2525 at 2935.945 kb on - strand, within Psyr_2525 at 2935.945 kb on - strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.070 kb on + strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.071 kb on - strand, within Psyr_2525 at 2936.073 kb on + strand, within Psyr_2525 at 2936.073 kb on + strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.074 kb on - strand, within Psyr_2525 at 2936.190 kb on + strand, within Psyr_2525 at 2936.367 kb on + strand, within Psyr_2525 at 2936.367 kb on + strand, within Psyr_2525 at 2936.368 kb on - strand, within Psyr_2525 at 2936.368 kb on - strand, within Psyr_2525 at 2936.490 kb on - strand, within Psyr_2525 at 2936.663 kb on - strand at 2936.770 kb on + strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.771 kb on - strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.893 kb on + strand, within Psyr_2526 at 2936.894 kb on - strand, within Psyr_2526 at 2936.894 kb on - strand, within Psyr_2526 at 2936.923 kb on + strand, within Psyr_2526 at 2936.924 kb on - strand, within Psyr_2526 at 2936.975 kb on - strand, within Psyr_2526 at 2937.060 kb on - strand, within Psyr_2526 at 2937.223 kb on + strand, within Psyr_2526 at 2937.223 kb on + strand, within Psyr_2526 at 2937.224 kb on - strand, within Psyr_2526 at 2937.224 kb on - strand, within Psyr_2526 at 2937.307 kb on + strand, within Psyr_2526 at 2937.308 kb on - strand, within Psyr_2526 at 2937.373 kb on + strand, within Psyr_2526 at 2937.374 kb on - strand, within Psyr_2526 at 2937.626 kb on + strand, within Psyr_2526 at 2937.626 kb on + strand, within Psyr_2526 at 2937.736 kb on + strand, within Psyr_2526 at 2937.736 kb on + strand, within Psyr_2526 at 2937.736 kb on + strand, within Psyr_2526 at 2937.737 kb on - strand, within Psyr_2526 at 2937.917 kb on - strand, within Psyr_2526 at 2937.931 kb on + strand, within Psyr_2526 at 2937.932 kb on - strand, within Psyr_2526 at 2937.937 kb on + strand, within Psyr_2526 at 2937.937 kb on + strand, within Psyr_2526 at 2937.938 kb on - strand, within Psyr_2526 at 2938.003 kb on + strand, within Psyr_2526 at 2938.039 kb on + strand at 2938.039 kb on + strand at 2938.040 kb on - strand at 2938.040 kb on - strand at 2938.070 kb on + strand at 2938.152 kb on + strand at 2938.152 kb on + strand at 2938.152 kb on + strand at 2938.221 kb on + strand at 2938.221 kb on + strand at 2938.221 kb on + strand at 2938.266 kb on - strand at 2938.286 kb on + strand at 2938.286 kb on + strand at 2938.286 kb on + strand at 2938.286 kb on + strand at 2938.286 kb on + strand at 2938.491 kb on + strand, within Psyr_2527 at 2938.588 kb on - strand, within Psyr_2527 at 2938.636 kb on - strand, within Psyr_2527 at 2938.677 kb on + strand, within Psyr_2527 at 2938.678 kb on - strand, within Psyr_2527 at 2938.678 kb on - strand, within Psyr_2527 at 2938.681 kb on - strand, within Psyr_2527 at 2938.681 kb on - strand, within Psyr_2527 at 2938.707 kb on + strand, within Psyr_2527
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Benzalkonium Chloride 6.25 ug/ml remove 2,935,609 + +1.8 2,935,609 + +2.4 2,935,612 - -1.0 2,935,877 - Psyr_2525 0.23 +3.0 2,935,927 - Psyr_2525 0.28 +1.8 2,935,927 - Psyr_2525 0.28 +2.6 2,935,927 - Psyr_2525 0.28 -0.2 2,935,927 - Psyr_2525 0.28 -0.6 2,935,945 - Psyr_2525 0.30 -2.3 2,935,945 - Psyr_2525 0.30 -0.6 2,936,070 + Psyr_2525 0.44 +1.8 2,936,070 + Psyr_2525 0.44 +1.4 2,936,070 + Psyr_2525 0.44 -2.4 2,936,070 + Psyr_2525 0.44 +0.1 2,936,070 + Psyr_2525 0.44 +1.4 2,936,070 + Psyr_2525 0.44 -0.9 2,936,070 + Psyr_2525 0.44 +0.8 2,936,070 + Psyr_2525 0.44 -0.2 2,936,070 + Psyr_2525 0.44 -2.0 2,936,071 - Psyr_2525 0.44 +3.5 2,936,071 - Psyr_2525 0.44 +1.8 2,936,071 - Psyr_2525 0.44 +4.4 2,936,071 - Psyr_2525 0.44 +0.8 2,936,071 - Psyr_2525 0.44 +0.3 2,936,071 - Psyr_2525 0.44 +3.5 2,936,073 + Psyr_2525 0.44 -0.2 2,936,073 + Psyr_2525 0.44 +0.3 2,936,074 - Psyr_2525 0.44 +2.6 2,936,074 - Psyr_2525 0.44 -0.2 2,936,074 - Psyr_2525 0.44 +3.3 2,936,074 - Psyr_2525 0.44 +4.2 2,936,074 - Psyr_2525 0.44 +2.6 2,936,190 + Psyr_2525 0.57 +0.8 2,936,367 + Psyr_2525 0.76 +1.8 2,936,367 + Psyr_2525 0.76 -2.3 2,936,368 - Psyr_2525 0.76 +0.6 2,936,368 - Psyr_2525 0.76 -3.6 2,936,490 - Psyr_2525 0.89 +1.8 2,936,663 - -1.4 2,936,770 + Psyr_2526 0.11 -0.9 2,936,771 - Psyr_2526 0.11 +1.4 2,936,771 - Psyr_2526 0.11 +1.4 2,936,771 - Psyr_2526 0.11 -2.9 2,936,893 + Psyr_2526 0.19 +1.4 2,936,893 + Psyr_2526 0.19 -2.7 2,936,893 + Psyr_2526 0.19 +4.3 2,936,894 - Psyr_2526 0.19 +0.8 2,936,894 - Psyr_2526 0.19 +2.4 2,936,923 + Psyr_2526 0.20 -0.2 2,936,924 - Psyr_2526 0.21 +3.7 2,936,975 - Psyr_2526 0.24 +2.2 2,937,060 - Psyr_2526 0.29 -1.5 2,937,223 + Psyr_2526 0.39 +3.5 2,937,223 + Psyr_2526 0.39 +0.8 2,937,224 - Psyr_2526 0.39 +2.4 2,937,224 - Psyr_2526 0.39 +1.8 2,937,307 + Psyr_2526 0.45 +0.0 2,937,308 - Psyr_2526 0.45 +0.6 2,937,373 + Psyr_2526 0.49 -0.8 2,937,374 - Psyr_2526 0.49 -0.9 2,937,626 + Psyr_2526 0.65 +0.8 2,937,626 + Psyr_2526 0.65 +2.2 2,937,736 + Psyr_2526 0.72 +1.4 2,937,736 + Psyr_2526 0.72 +2.7 2,937,736 + Psyr_2526 0.72 +0.1 2,937,737 - Psyr_2526 0.72 +1.4 2,937,917 - Psyr_2526 0.83 -0.6 2,937,931 + Psyr_2526 0.84 +0.7 2,937,932 - Psyr_2526 0.84 -3.7 2,937,937 + Psyr_2526 0.84 +2.7 2,937,937 + Psyr_2526 0.84 +0.8 2,937,938 - Psyr_2526 0.84 +1.8 2,938,003 + Psyr_2526 0.89 -1.9 2,938,039 + -2.4 2,938,039 + +1.8 2,938,040 - +2.8 2,938,040 - -2.2 2,938,070 + -0.4 2,938,152 + -4.1 2,938,152 + -1.5 2,938,152 + +0.8 2,938,221 + +4.7 2,938,221 + +3.4 2,938,221 + +1.4 2,938,266 - -2.2 2,938,286 + +4.0 2,938,286 + +0.6 2,938,286 + -0.2 2,938,286 + +1.8 2,938,286 + -1.0 2,938,491 + Psyr_2527 0.19 +1.8 2,938,588 - Psyr_2527 0.27 +3.0 2,938,636 - Psyr_2527 0.31 +2.4 2,938,677 + Psyr_2527 0.35 -0.3 2,938,678 - Psyr_2527 0.35 -0.5 2,938,678 - Psyr_2527 0.35 +1.4 2,938,681 - Psyr_2527 0.35 -1.7 2,938,681 - Psyr_2527 0.35 +1.4 2,938,707 + Psyr_2527 0.37 +3.2
Or see this region's nucleotide sequence