Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2477

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,871,074	-		Psyr_2476	0.65	-0.5
2,871,074	-		Psyr_2476	0.65	-1.7
2,871,074	-		Psyr_2476	0.65	-1.5
2,871,074	-		Psyr_2476	0.65	+0.1
2,871,149	+		Psyr_2476	0.74	-2.1
2,871,149	+		Psyr_2476	0.74	-0.1
2,871,150	-		Psyr_2476	0.74	-0.8
2,871,458	+				+3.5
2,871,551	+				-1.5
2,871,551	+				+3.2
2,871,552	-				-0.9
2,871,552	-				+2.5
2,871,604	-				-0.4
2,871,903	+		Psyr_2477	0.52	+2.5
2,871,904	-		Psyr_2477	0.52	+1.5
2,871,906	+		Psyr_2477	0.53	+1.5
2,871,906	+		Psyr_2477	0.53	-0.9
2,871,906	+		Psyr_2477	0.53	-0.1
2,871,907	-		Psyr_2477	0.53	-1.0
2,871,907	-		Psyr_2477	0.53	+2.5
2,871,916	+		Psyr_2477	0.54	+3.1
2,871,916	+		Psyr_2477	0.54	-2.1
2,871,943	+		Psyr_2477	0.58	+1.1
2,871,944	-		Psyr_2477	0.58	+2.9
2,872,107	+		Psyr_2477	0.83	-4.1
2,872,107	+		Psyr_2477	0.83	-0.0
2,872,107	+		Psyr_2477	0.83	+2.7
2,872,107	+		Psyr_2477	0.83	+3.2
2,872,107	+		Psyr_2477	0.83	-0.6
2,872,108	-		Psyr_2477	0.83	-2.7
2,872,213	+				+2.9
2,872,214	-				-0.1
2,872,214	-				-1.3
2,872,269	+				+0.9
2,872,269	+				-1.3
2,872,277	-				-0.6
2,872,409	+				+0.5
2,872,409	+				+1.5
2,872,409	+				-1.9
2,872,409	+				+0.6
2,872,409	+				+0.9
2,872,409	+				+3.6
2,872,409	+				+3.7
2,872,410	-				+1.1
2,872,506	-		Psyr_2478	0.13	-1.2
2,872,508	+		Psyr_2478	0.13	+3.2
2,872,931	+		Psyr_2478	0.38	+1.9
2,872,932	-		Psyr_2478	0.38	-2.9
2,872,932	-		Psyr_2478	0.38	+3.0
2,872,932	-		Psyr_2478	0.38	+3.5
2,872,983	-		Psyr_2478	0.41	-1.1
2,873,097	-		Psyr_2478	0.47	+3.5