Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2453

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,840,657	+				+1.9
2,840,658	-				+4.0
2,840,658	-				-0.5
2,840,659	+				-1.9
2,840,660	-				+0.5
2,840,731	+				-2.9
2,840,733	+				-0.1
2,840,733	+				-3.1
2,840,733	+				+1.6
2,840,734	-				+3.2
2,840,734	-				-2.4
2,840,734	-				+0.9
2,840,734	-				+2.9
2,840,827	+				+4.6
2,840,827	+				-1.0
2,840,828	-				+1.5
2,840,905	+		Psyr_2452	0.16	+0.9
2,841,292	-		Psyr_2452	0.64	+2.2
2,841,453	+		Psyr_2452	0.83	-3.0
2,841,453	+		Psyr_2452	0.83	+3.2
2,841,453	+		Psyr_2452	0.83	+1.5
2,841,453	+		Psyr_2452	0.83	-0.5
2,841,453	+		Psyr_2452	0.83	+1.0
2,841,453	+		Psyr_2452	0.83	-2.0
2,841,453	+		Psyr_2452	0.83	-1.2
2,841,453	+		Psyr_2452	0.83	+4.9
2,841,453	+		Psyr_2452	0.83	-1.3
2,841,454	-		Psyr_2452	0.84	+2.2
2,841,454	-		Psyr_2452	0.84	+1.9
2,841,454	-		Psyr_2452	0.84	-1.6
2,841,454	-		Psyr_2452	0.84	+1.5
2,841,454	-		Psyr_2452	0.84	-2.2
2,841,454	-		Psyr_2452	0.84	+1.5
2,841,454	-		Psyr_2452	0.84	+0.9
2,841,454	-		Psyr_2452	0.84	+1.9
2,841,454	-		Psyr_2452	0.84	+0.3
2,841,588	+				+1.9
2,841,588	+				-0.8
2,841,588	+				-2.1
2,841,588	+				+0.2
2,841,588	+				+2.9
2,841,588	+				+1.9
2,841,589	-				+2.7
2,841,589	-				+3.7
2,841,589	-				-1.4
2,841,589	-				-1.5
2,841,589	-				-0.5
2,841,589	-				-1.8
2,841,589	-				+2.9
2,841,624	+				+1.9
2,841,624	+				-0.2
2,841,624	+				-0.3
2,841,625	-				+2.9
2,841,625	-				-0.9
2,841,818	+		Psyr_2453	0.23	-0.1
2,841,818	+		Psyr_2453	0.23	+3.8
2,841,818	+		Psyr_2453	0.23	-2.2
2,841,819	-		Psyr_2453	0.23	-0.1
2,841,819	-		Psyr_2453	0.23	+0.9
2,842,052	-		Psyr_2453	0.51	+1.9
2,842,133	+		Psyr_2453	0.61	+2.7
2,842,133	+		Psyr_2453	0.61	-1.5
2,842,133	+		Psyr_2453	0.61	-1.5
2,842,133	+		Psyr_2453	0.61	-1.6
2,842,133	+		Psyr_2453	0.61	+2.7
2,842,133	+		Psyr_2453	0.61	-0.8
2,842,134	-		Psyr_2453	0.61	-1.1
2,842,134	-		Psyr_2453	0.61	-2.2
2,842,134	-		Psyr_2453	0.61	-1.3
2,842,134	-		Psyr_2453	0.61	-1.8
2,842,134	-		Psyr_2453	0.61	-0.2
2,842,134	-		Psyr_2453	0.61	-2.0
2,842,416	-				+2.2
2,842,416	-				-2.9
2,842,461	-				-0.2
2,842,466	+				+3.9
2,842,548	+		Psyr_2454	0.14	+4.1
2,842,548	+		Psyr_2454	0.14	-0.5
2,842,549	-		Psyr_2454	0.14	+3.7
2,842,549	-		Psyr_2454	0.14	-1.6
2,842,549	-		Psyr_2454	0.14	-0.4
2,842,593	+		Psyr_2454	0.19	-0.7
2,842,593	+		Psyr_2454	0.19	+2.5
2,842,593	+		Psyr_2454	0.19	+0.6
2,842,593	+		Psyr_2454	0.19	+2.9
2,842,594	-		Psyr_2454	0.19	+3.2
2,842,594	-		Psyr_2454	0.19	-0.6
2,842,594	-		Psyr_2454	0.19	-0.1
2,842,594	-		Psyr_2454	0.19	-1.4
2,842,594	-		Psyr_2454	0.19	+0.2
2,842,594	-		Psyr_2454	0.19	-0.5
2,842,756	-		Psyr_2454	0.39	+2.7
2,842,851	+		Psyr_2454	0.50	-1.0
2,842,851	+		Psyr_2454	0.50	-0.5
2,842,852	-		Psyr_2454	0.50	+2.9
2,842,852	-		Psyr_2454	0.50	-0.8
2,842,852	-		Psyr_2454	0.50	+0.9
2,842,852	-		Psyr_2454	0.50	+1.5
2,842,912	-		Psyr_2454	0.57	+4.3
2,842,912	-				+1.5
2,843,001	+		Psyr_2454	0.68	-0.9
2,843,001	+		Psyr_2454	0.68	+2.5
2,843,136	-		Psyr_2454	0.84	+3.0
2,843,276	-				+0.9
2,843,284	+				+3.0
2,843,284	+				-0.6
2,843,284	+				+4.5
2,843,284	+				-1.2
2,843,285	-				+3.3
2,843,285	-				+2.2
2,843,417	+		Psyr_2455	0.10	+2.2
2,843,418	-		Psyr_2455	0.10	+1.5
2,843,440	+		Psyr_2455	0.12	+0.7
2,843,440	+		Psyr_2455	0.12	+2.7
2,843,441	-		Psyr_2455	0.12	+0.1