Experiment: KB with Benzalkonium Chloride 6.25 ug/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psyr_2436 and Psyr_2437 are separated by 17 nucleotides Psyr_2437 and Psyr_2438 are separated by 30 nucleotides Psyr_2438 and Psyr_2439 are separated by 10 nucleotides
Psyr_2436: Psyr_2436 - Mannitol dehydrogenase, at 2,820,460 to 2,821,941
_2436
Psyr_2437: Psyr_2437 - mannitol ABC transporter ATP-binding protein / sorbitol ABC transporter ATP-binding protein, at 2,821,959 to 2,823,065
_2437
Psyr_2438: Psyr_2438 - sorbitol ABC transporter membrane protein / mannitol ABC transporter membrane protein, at 2,823,096 to 2,823,929
_2438
Psyr_2439: Psyr_2439 - mannitol ABC transporter membrane protein / sorbitol ABC transporter membrane protein, at 2,823,940 to 2,824,872
_2439
Position (kb)
2821
2822
2823
2824 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1
2
3
4 at 2821.020 kb on - strand, within Psyr_2436 at 2821.071 kb on - strand, within Psyr_2436 at 2821.246 kb on - strand, within Psyr_2436 at 2821.246 kb on - strand, within Psyr_2436 at 2821.246 kb on - strand, within Psyr_2436 at 2821.246 kb on - strand, within Psyr_2436 at 2821.248 kb on + strand, within Psyr_2436 at 2821.249 kb on - strand, within Psyr_2436 at 2821.402 kb on - strand, within Psyr_2436 at 2821.694 kb on + strand, within Psyr_2436 at 2821.694 kb on + strand, within Psyr_2436 at 2821.695 kb on - strand, within Psyr_2436 at 2821.700 kb on + strand, within Psyr_2436 at 2821.700 kb on + strand, within Psyr_2436 at 2821.701 kb on - strand, within Psyr_2436 at 2821.701 kb on - strand, within Psyr_2436 at 2821.701 kb on - strand, within Psyr_2436 at 2821.701 kb on - strand, within Psyr_2436 at 2821.701 kb on - strand, within Psyr_2436 at 2821.808 kb on + strand at 2821.808 kb on + strand at 2821.808 kb on + strand at 2822.085 kb on - strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.128 kb on + strand, within Psyr_2437 at 2822.129 kb on - strand, within Psyr_2437 at 2822.129 kb on - strand, within Psyr_2437 at 2822.129 kb on - strand, within Psyr_2437 at 2822.129 kb on - strand, within Psyr_2437 at 2822.402 kb on - strand, within Psyr_2437 at 2822.402 kb on - strand, within Psyr_2437 at 2822.481 kb on + strand, within Psyr_2437 at 2822.500 kb on + strand, within Psyr_2437 at 2822.500 kb on + strand, within Psyr_2437 at 2822.708 kb on + strand, within Psyr_2437 at 2822.709 kb on - strand, within Psyr_2437 at 2822.807 kb on - strand, within Psyr_2437 at 2822.815 kb on + strand, within Psyr_2437 at 2822.816 kb on - strand, within Psyr_2437 at 2822.816 kb on - strand, within Psyr_2437 at 2823.097 kb on + strand at 2823.229 kb on + strand, within Psyr_2438 at 2823.230 kb on - strand, within Psyr_2438 at 2823.442 kb on + strand, within Psyr_2438 at 2823.442 kb on + strand, within Psyr_2438 at 2823.442 kb on + strand, within Psyr_2438 at 2823.448 kb on + strand, within Psyr_2438 at 2823.448 kb on + strand, within Psyr_2438 at 2823.448 kb on + strand, within Psyr_2438 at 2823.448 kb on + strand, within Psyr_2438 at 2823.448 kb on + strand, within Psyr_2438 at 2823.449 kb on - strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.487 kb on + strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.488 kb on - strand, within Psyr_2438 at 2823.544 kb on + strand, within Psyr_2438 at 2823.545 kb on - strand, within Psyr_2438 at 2823.545 kb on - strand, within Psyr_2438 at 2823.743 kb on + strand, within Psyr_2438 at 2823.752 kb on - strand, within Psyr_2438 at 2823.752 kb on - strand, within Psyr_2438 at 2824.004 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction KB with Benzalkonium Chloride 6.25 ug/ml remove 2,821,020 - Psyr_2436 0.38 -1.0 2,821,071 - Psyr_2436 0.41 +2.2 2,821,246 - Psyr_2436 0.53 -0.1 2,821,246 - Psyr_2436 0.53 +1.1 2,821,246 - Psyr_2436 0.53 -0.8 2,821,246 - Psyr_2436 0.53 -0.6 2,821,248 + Psyr_2436 0.53 -0.9 2,821,249 - Psyr_2436 0.53 +3.1 2,821,402 - Psyr_2436 0.64 -1.1 2,821,694 + Psyr_2436 0.83 -2.8 2,821,694 + Psyr_2436 0.83 -1.5 2,821,695 - Psyr_2436 0.83 -1.7 2,821,700 + Psyr_2436 0.84 -0.2 2,821,700 + Psyr_2436 0.84 +2.2 2,821,701 - Psyr_2436 0.84 +2.5 2,821,701 - Psyr_2436 0.84 -2.8 2,821,701 - Psyr_2436 0.84 -2.8 2,821,701 - Psyr_2436 0.84 +1.9 2,821,701 - Psyr_2436 0.84 +2.2 2,821,808 + +2.5 2,821,808 + -4.3 2,821,808 + +1.0 2,822,085 - Psyr_2437 0.11 +2.2 2,822,128 + Psyr_2437 0.15 -1.4 2,822,128 + Psyr_2437 0.15 +3.9 2,822,128 + Psyr_2437 0.15 +2.7 2,822,128 + Psyr_2437 0.15 +3.2 2,822,128 + Psyr_2437 0.15 +2.2 2,822,128 + Psyr_2437 0.15 +2.5 2,822,128 + Psyr_2437 0.15 -0.3 2,822,128 + Psyr_2437 0.15 -0.7 2,822,128 + Psyr_2437 0.15 +1.9 2,822,129 - Psyr_2437 0.15 +1.9 2,822,129 - Psyr_2437 0.15 -2.2 2,822,129 - Psyr_2437 0.15 -2.6 2,822,129 - Psyr_2437 0.15 -0.1 2,822,402 - Psyr_2437 0.40 +3.1 2,822,402 - Psyr_2437 0.40 +2.5 2,822,481 + Psyr_2437 0.47 -1.9 2,822,500 + Psyr_2437 0.49 +1.5 2,822,500 + Psyr_2437 0.49 +1.4 2,822,708 + Psyr_2437 0.68 +2.5 2,822,709 - Psyr_2437 0.68 +0.9 2,822,807 - Psyr_2437 0.77 +1.5 2,822,815 + Psyr_2437 0.77 -2.8 2,822,816 - Psyr_2437 0.77 +2.9 2,822,816 - Psyr_2437 0.77 +2.5 2,823,097 + -1.7 2,823,229 + Psyr_2438 0.16 -1.5 2,823,230 - Psyr_2438 0.16 +1.2 2,823,442 + Psyr_2438 0.41 +3.6 2,823,442 + Psyr_2438 0.41 +3.6 2,823,442 + Psyr_2438 0.41 +3.6 2,823,448 + Psyr_2438 0.42 -0.1 2,823,448 + Psyr_2438 0.42 -1.9 2,823,448 + Psyr_2438 0.42 +1.5 2,823,448 + Psyr_2438 0.42 +1.5 2,823,448 + Psyr_2438 0.42 +2.7 2,823,449 - Psyr_2438 0.42 -0.6 2,823,487 + Psyr_2438 0.47 +2.7 2,823,487 + Psyr_2438 0.47 +1.5 2,823,487 + Psyr_2438 0.47 -2.0 2,823,487 + Psyr_2438 0.47 -0.3 2,823,487 + Psyr_2438 0.47 -1.2 2,823,487 + Psyr_2438 0.47 +3.0 2,823,488 - Psyr_2438 0.47 +0.7 2,823,488 - Psyr_2438 0.47 -2.4 2,823,488 - Psyr_2438 0.47 -0.5 2,823,488 - Psyr_2438 0.47 -2.2 2,823,488 - Psyr_2438 0.47 +1.9 2,823,488 - Psyr_2438 0.47 +4.2 2,823,544 + Psyr_2438 0.54 +1.9 2,823,545 - Psyr_2438 0.54 -0.4 2,823,545 - Psyr_2438 0.54 -1.9 2,823,743 + Psyr_2438 0.78 -5.9 2,823,752 - Psyr_2438 0.79 -0.7 2,823,752 - Psyr_2438 0.79 -1.3 2,824,004 - +2.5
Or see this region's nucleotide sequence