Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2426

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,806,020	-		Psyr_2424	0.54	-1.3
2,806,059	+		Psyr_2424	0.59	-0.1
2,806,059	+		Psyr_2424	0.59	+1.9
2,806,059	+		Psyr_2424	0.59	+3.7
2,806,059	+		Psyr_2424	0.59	+0.6
2,806,060	-		Psyr_2424	0.59	-4.7
2,806,267	+		Psyr_2424	0.86	+1.5
2,806,267	+		Psyr_2424	0.86	+3.1
2,806,268	-		Psyr_2424	0.86	+0.5
2,806,274	-		Psyr_2424	0.87	+1.9
2,806,274	-		Psyr_2424	0.87	-2.2
2,806,274	-		Psyr_2424	0.87	-1.5
2,806,444	+				-0.1
2,806,444	+				+3.1
2,806,445	-				-0.4
2,806,481	-				+2.5
2,806,481	-				+3.2
2,806,534	-		Psyr_2425	0.17	-0.4
2,806,546	-		Psyr_2425	0.22	-0.7
2,806,592	+		Psyr_2425	0.41	-0.1
2,806,592	+		Psyr_2425	0.41	+4.2
2,806,592	+		Psyr_2425	0.41	-0.1
2,806,592	+		Psyr_2425	0.41	-0.9
2,806,592	+		Psyr_2425	0.41	-1.1
2,806,592	+		Psyr_2425	0.41	-0.1
2,806,593	-		Psyr_2425	0.41	+3.8
2,806,593	-		Psyr_2425	0.41	-0.5
2,806,593	-		Psyr_2425	0.41	-1.2
2,806,593	-		Psyr_2425	0.41	-1.0
2,806,593	-		Psyr_2425	0.41	-1.4
2,806,593	-		Psyr_2425	0.41	-1.3
2,806,593	-		Psyr_2425	0.41	-0.6
2,806,593	-		Psyr_2425	0.41	+1.5
2,806,593	-		Psyr_2425	0.41	+3.5
2,806,593	-		Psyr_2425	0.41	+1.5
2,806,593	-		Psyr_2425	0.41	-0.4
2,806,593	-		Psyr_2425	0.41	-1.4
2,806,593	-		Psyr_2425	0.41	-1.5
2,806,653	+		Psyr_2425	0.66	+0.3
2,806,653	+		Psyr_2425	0.66	-2.1
2,806,654	-		Psyr_2425	0.66	+4.7
2,806,654	-		Psyr_2425	0.66	-0.5
2,806,673	+		Psyr_2425	0.74	+2.9
2,806,673	+		Psyr_2425	0.74	+0.9
2,806,674	-		Psyr_2425	0.74	+0.9
2,806,725	-				+1.5
2,806,745	+				-1.4
2,806,767	+				-1.1
2,806,768	-				+3.5
2,806,774	+				-0.1
2,806,775	-				+0.6
2,806,836	+				+2.2
2,806,836	+				+1.9
2,806,837	-				-1.3
2,806,837	-				+0.5
2,806,837	-				-1.3
2,806,921	-				-1.1
2,807,304	-		Psyr_2426	0.59	+3.3
2,807,623	-				-4.5
2,807,635	+				-2.0
2,807,635	+				-0.4
2,807,677	+				+3.5
2,807,678	-				+5.3
2,807,680	+				-1.9
2,807,681	-				+4.7
2,807,799	+		Psyr_2427	0.12	-0.0
2,807,800	-		Psyr_2427	0.12	-0.6
2,807,821	+		Psyr_2427	0.13	-0.4
2,807,822	-		Psyr_2427	0.13	+5.1
2,807,855	-		Psyr_2427	0.16	+3.7
2,807,857	+		Psyr_2427	0.16	-2.1
2,807,857	+		Psyr_2427	0.16	+2.9
2,807,857	+		Psyr_2427	0.16	+3.3
2,807,857	+		Psyr_2427	0.16	+0.7
2,807,857	+		Psyr_2427	0.16	+4.1
2,807,857	+		Psyr_2427	0.16	+3.7
2,807,857	+		Psyr_2427	0.16	+3.8
2,807,857	+		Psyr_2427	0.16	+2.2
2,807,858	-		Psyr_2427	0.16	+1.9
2,807,858	-		Psyr_2427	0.16	-1.8
2,807,858	-		Psyr_2427	0.16	+4.5
2,807,858	-		Psyr_2427	0.16	-0.5
2,807,858	-		Psyr_2427	0.16	+3.6
2,807,858	-		Psyr_2427	0.16	+0.3
2,807,858	-		Psyr_2427	0.16	-0.1
2,807,941	-		Psyr_2427	0.23	+1.9
2,807,941	-		Psyr_2427	0.23	+4.0
2,807,941	-		Psyr_2427	0.23	+1.5
2,808,070	+		Psyr_2427	0.33	+0.6
2,808,071	-		Psyr_2427	0.33	-0.2
2,808,082	+		Psyr_2427	0.34	+3.3
2,808,082	+		Psyr_2427	0.34	-0.8
2,808,083	-		Psyr_2427	0.34	+3.6
2,808,083	-		Psyr_2427	0.34	-1.1
2,808,086	+		Psyr_2427	0.34	+4.8
2,808,086	+		Psyr_2427	0.34	-1.3
2,808,086	+		Psyr_2427	0.34	+4.1
2,808,087	-		Psyr_2427	0.34	+3.3
2,808,087	-		Psyr_2427	0.34	+2.5
2,808,087	-		Psyr_2427	0.34	-0.8
2,808,087	-		Psyr_2427	0.34	+3.5
2,808,103	+		Psyr_2427	0.35	+0.2
2,808,104	-		Psyr_2427	0.35	+3.1
2,808,218	-		Psyr_2427	0.44	+2.2
2,808,237	-		Psyr_2427	0.46	+3.3
2,808,269	+		Psyr_2427	0.48	+3.1
2,808,269	+		Psyr_2427	0.48	+1.5
2,808,322	+		Psyr_2427	0.52	+4.4
2,808,322	+		Psyr_2427	0.52	+1.5
2,808,323	-		Psyr_2427	0.52	+0.3
2,808,323	-		Psyr_2427	0.52	+3.8
2,808,386	+		Psyr_2427	0.57	+0.9
2,808,387	-		Psyr_2427	0.57	-0.4
2,808,421	+		Psyr_2427	0.60	+1.5
2,808,422	-		Psyr_2427	0.60	-0.9
2,808,422	-		Psyr_2427	0.60	-0.7
2,808,422	-		Psyr_2427	0.60	+1.5
2,808,422	-		Psyr_2427	0.60	+2.2
2,808,552	+		Psyr_2427	0.70	-0.1