Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2345

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,720,148	+		Psyr_2343	0.57	+0.9
2,720,148	+		Psyr_2343	0.57	-0.1
2,720,148	+		Psyr_2343	0.57	-0.6
2,720,148	+		Psyr_2343	0.57	+3.3
2,720,148	+		Psyr_2343	0.57	+0.6
2,720,148	+		Psyr_2343	0.57	-3.4
2,720,148	+		Psyr_2343	0.57	+2.7
2,720,149	-		Psyr_2343	0.57	-0.2
2,720,149	-		Psyr_2343	0.57	+3.3
2,720,149	-		Psyr_2343	0.57	-1.1
2,720,149	-		Psyr_2343	0.57	-0.5
2,720,149	-		Psyr_2343	0.57	+0.9
2,720,149	-		Psyr_2343	0.57	-1.0
2,720,149	-		Psyr_2343	0.57	+2.9
2,720,150	+		Psyr_2343	0.57	-3.9
2,720,150	+		Psyr_2343	0.57	+0.9
2,720,150	+		Psyr_2343	0.57	-4.4
2,720,150	+		Psyr_2343	0.57	+3.1
2,720,150	+		Psyr_2343	0.57	+1.9
2,720,150	+		Psyr_2343	0.57	+1.5
2,720,150	+		Psyr_2343	0.57	-2.2
2,720,150	+		Psyr_2343	0.57	-4.6
2,720,151	-		Psyr_2343	0.57	-0.3
2,720,151	-		Psyr_2343	0.57	-2.5
2,720,151	-		Psyr_2343	0.57	+1.5
2,720,151	-		Psyr_2343	0.57	+2.2
2,720,151	-		Psyr_2343	0.57	+3.2
2,720,151	-		Psyr_2343	0.57	-1.3
2,720,151	-		Psyr_2343	0.57	+3.5
2,720,152	+		Psyr_2343	0.57	-1.3
2,720,152	+		Psyr_2343	0.57	-0.1
2,720,152	+		Psyr_2343	0.57	-1.3
2,720,152	+		Psyr_2343	0.57	-2.9
2,720,152	+		Psyr_2343	0.57	+1.5
2,720,152	+		Psyr_2343	0.57	-3.0
2,720,152	+		Psyr_2343	0.57	-1.5
2,720,152	+		Psyr_2343	0.57	-0.1
2,720,153	-		Psyr_2343	0.58	-2.0
2,720,153	-		Psyr_2343	0.58	+0.3
2,720,206	+		Psyr_2343	0.67	-1.9
2,720,206	+		Psyr_2343	0.67	+2.5
2,720,206	+		Psyr_2343	0.67	-3.3
2,720,206	+		Psyr_2343	0.67	+3.9
2,720,207	-		Psyr_2343	0.67	-0.9
2,720,207	-		Psyr_2343	0.67	-1.0
2,720,312	-		Psyr_2343	0.85	-2.9
2,720,435	+				-0.4
2,720,435	+				-3.9
2,720,435	+				-1.3
2,720,436	-				+2.2
2,720,440	+				+1.5
2,720,440	+				-1.2
2,720,454	+				+0.2
2,720,520	+		Psyr_2344	0.26	-0.1
2,720,521	-		Psyr_2344	0.27	-1.6
2,720,521	-		Psyr_2344	0.27	+3.3
2,720,521	-		Psyr_2344	0.27	-0.6
2,720,534	+		Psyr_2344	0.32	-1.0
2,720,535	-		Psyr_2344	0.32	-2.0
2,720,535	-		Psyr_2344	0.32	+2.2
2,720,836	-				+2.5
2,720,854	+				+1.5
2,720,866	+				+1.9
2,720,951	+				+1.9
2,720,994	+				-2.4
2,720,995	-				-0.1
2,721,010	-				-0.9
2,721,101	+				-2.4
2,721,102	-				+2.5
2,721,209	+				-0.1
2,721,321	+		Psyr_2345	0.11	-1.3
2,721,322	-		Psyr_2345	0.12	-0.1
2,721,353	-		Psyr_2345	0.14	+0.9
2,721,510	+		Psyr_2345	0.24	+1.8
2,721,572	+		Psyr_2345	0.28	-2.2
2,721,573	-		Psyr_2345	0.28	+0.9
2,721,622	+		Psyr_2345	0.31	-0.1
2,721,767	-		Psyr_2345	0.40	-1.1
2,721,976	+		Psyr_2345	0.54	-3.5
2,722,039	+		Psyr_2345	0.58	-3.3
2,722,172	-		Psyr_2345	0.66	-4.0
2,722,272	+		Psyr_2345	0.73	-1.6
2,722,302	+		Psyr_2345	0.75	-3.1
2,722,347	+		Psyr_2345	0.78	+2.2
2,722,350	+		Psyr_2345	0.78	+3.3
2,722,350	+		Psyr_2345	0.78	+0.9
2,722,351	-		Psyr_2345	0.78	+0.9
2,722,351	-		Psyr_2345	0.78	-1.6
2,722,444	-		Psyr_2345	0.84	-0.1
2,722,447	+		Psyr_2345	0.84	+1.9
2,722,447	+		Psyr_2345	0.84	-0.1
2,722,597	+				-1.0
2,722,597	+				+0.9
2,722,598	-				-3.6
2,722,657	+				-3.7
2,722,687	+				-1.6
2,722,687	+				-1.8
2,722,688	-				-0.1
2,722,688	-				-2.1
2,722,688	-				-1.3
2,722,688	-				-1.1
2,722,689	+				-0.8
2,722,689	+				+1.5
2,722,689	+				-1.9
2,722,690	-				-2.7
2,722,690	-				-0.1
2,722,690	-				+0.9
2,722,694	+				+0.9
2,722,694	+				-2.9
2,722,694	+				+1.5
2,722,737	+				+3.1
2,722,738	-				+2.2
2,722,755	-				+0.9
2,722,769	+				-2.4
2,722,803	-		Psyr_2346	0.13	-0.1
2,722,822	+		Psyr_2346	0.15	-0.8
2,722,854	+		Psyr_2346	0.19	-1.9
2,722,854	+		Psyr_2346	0.19	+2.9
2,722,923	-		Psyr_2346	0.27	-3.3
2,722,923	-		Psyr_2346	0.27	-4.0
2,722,990	-		Psyr_2346	0.34	-3.8
2,723,070	+		Psyr_2346	0.43	-0.1
2,723,070	+		Psyr_2346	0.43	-0.1
2,723,075	-		Psyr_2346	0.44	-4.6
2,723,121	+		Psyr_2346	0.49	+0.6
2,723,121	+		Psyr_2346	0.49	+2.2
2,723,221	+		Psyr_2346	0.61	+1.5
2,723,222	-		Psyr_2346	0.61	-0.6
2,723,389	+		Psyr_2346	0.80	+0.9
2,723,389	+		Psyr_2346	0.80	-3.7
2,723,390	-		Psyr_2346	0.80	-0.1
2,723,396	+		Psyr_2346	0.81	+2.2
2,723,401	-		Psyr_2346	0.81	-0.1
2,723,401	-		Psyr_2346	0.81	-5.2
2,723,401	-		Psyr_2346	0.81	-0.1
2,723,442	-		Psyr_2346	0.86	+0.3
2,723,445	+		Psyr_2346	0.86	-0.1
2,723,446	-		Psyr_2346	0.86	-0.1
2,723,601	+				-0.1
2,723,602	-				-2.4