Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2228

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,588,889	-				+0.0
2,588,889	-				-2.1
2,588,918	-				+1.9
2,588,918	-				-0.9
2,588,918	-				-1.3
2,588,967	-		Psyr_2227	0.11	-2.4
2,588,987	+		Psyr_2227	0.16	-2.9
2,589,282	+		Psyr_2227	0.80	-0.0
2,589,332	+				-2.0
2,589,332	+				+0.2
2,589,409	+				+3.2
2,589,410	-				-2.7
2,589,418	+				-0.1
2,589,443	+				-1.4
2,589,453	+				-1.7
2,589,453	+				+3.5
2,589,453	+				+0.9
2,589,453	+				+2.2
2,589,454	-				+2.7
2,589,454	-				-0.7
2,589,457	+				+2.2
2,589,457	+				+2.0
2,589,474	+				-1.0
2,589,477	-				-3.8
2,589,521	+				+3.0
2,589,521	+				-0.9
2,589,522	-				-0.5
2,589,522	-				+2.9
2,589,522	-				-1.3
2,589,728	+				-1.9
2,589,729	-				-0.1
2,589,729	-				+2.2
2,590,111	+		Psyr_2228	0.47	-3.9
2,590,112	-		Psyr_2228	0.47	+0.3
2,590,112	-		Psyr_2228	0.47	+2.5
2,590,112	-		Psyr_2228	0.47	-0.3
2,590,112	-		Psyr_2228	0.47	+3.2
2,590,126	+		Psyr_2228	0.49	+1.5
2,590,126	+		Psyr_2228	0.49	+0.9
2,590,127	-		Psyr_2228	0.49	+0.9
2,590,136	+		Psyr_2228	0.50	-3.1
2,590,136	+		Psyr_2228	0.50	+3.3
2,590,137	-		Psyr_2228	0.50	-3.5
2,590,137	-		Psyr_2228	0.50	-1.9
2,590,325	-		Psyr_2228	0.76	-1.9
2,590,530	+				+3.7
2,590,531	-				+2.5
2,590,580	-				+0.9
2,590,611	+				-0.1
2,590,611	+				-1.6
2,590,611	+				-1.2
2,590,612	-				+3.1
2,590,712	+				-0.3
2,590,773	+		Psyr_2229	0.10	+2.2
2,590,773	+		Psyr_2229	0.10	+2.3
2,590,774	-		Psyr_2229	0.10	-0.9
2,590,779	+		Psyr_2229	0.11	+3.6
2,590,827	+		Psyr_2229	0.13	+3.2
2,590,828	-		Psyr_2229	0.13	+2.7
2,590,828	-		Psyr_2229	0.13	+1.3
2,590,923	+		Psyr_2229	0.18	+1.9
2,591,331	+		Psyr_2229	0.37	+1.5
2,591,416	-		Psyr_2229	0.41	+1.5
2,591,472	+		Psyr_2229	0.44	+3.1
2,591,472	+		Psyr_2229	0.44	+0.3
2,591,472	+		Psyr_2229	0.44	+3.1
2,591,472	+		Psyr_2229	0.44	-3.8
2,591,472	+		Psyr_2229	0.44	-1.5
2,591,472	+		Psyr_2229	0.44	-3.4
2,591,472	+		Psyr_2229	0.44	+1.5
2,591,473	-		Psyr_2229	0.44	+1.3
2,591,473	-		Psyr_2229	0.44	+1.9
2,591,473	-		Psyr_2229	0.44	-2.1
2,591,473	-		Psyr_2229	0.44	-0.9
2,591,473	-		Psyr_2229	0.44	-0.8