Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2220

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,578,682	-				+0.2
2,578,683	+				+2.7
2,578,777	-				-0.1
2,578,777	-		Psyr_2219	0.15	-1.9
2,579,153	+		Psyr_2219	0.55	+0.9
2,579,153	+		Psyr_2219	0.55	-3.1
2,579,153	+		Psyr_2219	0.55	-1.0
2,579,153	+		Psyr_2219	0.55	+2.2
2,579,153	+		Psyr_2219	0.55	-1.7
2,579,154	-		Psyr_2219	0.55	+2.7
2,579,154	-		Psyr_2219	0.55	+2.9
2,579,154	-		Psyr_2219	0.55	+3.2
2,579,154	-		Psyr_2219	0.55	+3.8
2,579,256	+		Psyr_2219	0.65	-1.4
2,579,257	-		Psyr_2219	0.65	-2.2
2,579,269	+		Psyr_2219	0.67	-0.6
2,579,270	-		Psyr_2219	0.67	+0.3
2,579,504	-				+2.7
2,579,504	-				-0.7
2,579,504	-				+1.9
2,579,584	+				+0.0
2,579,585	-				-2.3
2,579,585	-				-0.0
2,579,585	-				+2.2
2,579,585	-				-3.2
2,579,585	-				-0.1
2,579,992	-		Psyr_2220	0.16	-0.8
2,579,992	-		Psyr_2220	0.16	+3.3
2,580,836	+		Psyr_2220	0.60	-0.1
2,580,836	+		Psyr_2220	0.60	-1.3
2,580,836	+		Psyr_2220	0.60	+0.5
2,580,836	+		Psyr_2220	0.60	+1.5
2,580,836	+		Psyr_2220	0.60	-2.2
2,580,837	-		Psyr_2220	0.60	+1.9
2,581,115	-		Psyr_2220	0.74	+1.9
2,581,137	-		Psyr_2220	0.75	+0.9
2,581,139	+		Psyr_2220	0.75	+3.2
2,581,139	+		Psyr_2220	0.75	+2.9
2,581,140	-		Psyr_2220	0.75	-0.9
2,581,140	-		Psyr_2220	0.75	-3.7
2,581,140	-		Psyr_2220	0.75	-3.1
2,581,188	-		Psyr_2220	0.78	-2.1
2,581,211	+		Psyr_2220	0.79	+0.4
2,581,212	-		Psyr_2220	0.79	-1.1
2,581,247	+		Psyr_2220	0.81	-0.1
2,581,247	+		Psyr_2220	0.81	+0.2
2,581,248	-		Psyr_2220	0.81	+1.9
2,581,248	-		Psyr_2220	0.81	+2.5
2,581,248	-		Psyr_2220	0.81	+2.9
2,581,248	-		Psyr_2220	0.81	-1.0
2,581,248	-		Psyr_2220	0.81	-2.2
2,581,269	-		Psyr_2220	0.82	-0.5
2,581,277	+		Psyr_2220	0.82	-1.3
2,581,277	+		Psyr_2220	0.82	-1.9
2,581,278	-		Psyr_2220	0.82	+1.5
2,581,278	-		Psyr_2220	0.82	-0.9
2,581,278	-		Psyr_2220	0.82	+0.3
2,581,370	+		Psyr_2220	0.87	-1.9
2,581,370	+		Psyr_2220	0.87	-2.3
2,581,370	+		Psyr_2220	0.87	+0.9
2,581,370	+		Psyr_2220	0.87	+3.2
2,581,370	+		Psyr_2220	0.87	-0.1
2,581,371	-		Psyr_2220	0.87	-1.0
2,581,371	-		Psyr_2220	0.87	+0.9
2,581,371	-		Psyr_2220	0.87	-2.1
2,581,371	-		Psyr_2220	0.87	+1.5
2,581,421	+		Psyr_2220	0.90	-1.7
2,581,421	+		Psyr_2220	0.90	+1.5
2,581,421	+		Psyr_2220	0.90	-1.4
2,581,422	-		Psyr_2220	0.90	+0.9
2,581,422	-		Psyr_2220	0.90	+1.5
2,581,422	-		Psyr_2220	0.90	+1.5
2,581,438	-				-3.2
2,581,559	-				+0.9
2,581,559	-				+2.4
2,581,562	-				+2.2
2,581,668	+				+1.5
2,581,709	-				+3.2
2,581,709	-				+2.9
2,581,715	+				+1.9
2,581,735	+				+1.9
2,581,736	-				+2.2
2,581,821	+				-0.1
2,581,835	+				-2.0
2,581,835	+				+3.5
2,581,835	+				-1.3
2,581,835	+				+2.2
2,581,835	+				-0.1
2,581,836	-				-2.4
2,581,836	-				+2.5
2,581,836	-				+4.3
2,581,836	-				+1.6
2,581,836	-				+1.9
2,581,836	-				-0.2
2,581,840	-				+0.8
2,581,887	+				-2.1
2,581,887	+				+3.2
2,581,887	+				-2.1
2,581,887	+				-0.6
2,581,888	-				+3.3
2,581,888	-				+4.4
2,582,109	+		Psyr_2221	0.48	+1.5
2,582,194	-		Psyr_2221	0.63	-1.8
2,582,354	+				-3.4
2,582,535	+				+2.9