Strain Fitness in Pseudomonas syringae pv. syringae B728a around Psyr_2116

Experiment: KB with Benzalkonium Chloride 6.25 ug/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	KB with Benzalkonium Chloride 6.25 ug/ml
2,473,695	+				+0.8
2,473,743	+				-1.9
2,473,743	+				+1.8
2,473,743	+				-0.7
2,473,743	+				-1.5
2,473,745	+				-1.5
2,473,797	+				+2.8
2,473,804	+				-2.0
2,473,804	+				-1.6
2,473,961	+				-1.3
2,473,961	+				+2.6
2,473,961	+				-0.6
2,473,961	+				+0.8
2,473,962	-				-3.5
2,473,962	-				+1.8
2,474,132	+		Psyr_2115	0.30	-0.3
2,474,132	+		Psyr_2115	0.30	-1.2
2,474,133	-		Psyr_2115	0.31	+0.8
2,474,317	+		Psyr_2115	0.77	+4.5
2,474,317	+		Psyr_2115	0.77	-2.6
2,474,318	-		Psyr_2115	0.78	-1.9
2,474,393	+				+3.3
2,474,393	+				-0.3
2,474,394	-				-0.2
2,474,522	-				-2.2
2,474,522	-				-1.9
2,474,548	+				+4.7
2,474,570	+				+0.8
2,474,571	-				+0.8
2,474,571	-				+0.6
2,474,571	-				-2.3
2,474,571	-				-0.2
2,474,656	+				+3.7
2,474,656	+				+2.4
2,474,656	+				-0.2
2,474,656	+				+4.2
2,474,656	+				-0.4
2,474,656	+				-3.2
2,474,656	+				-0.0
2,474,656	+				+1.9
2,474,656	+				+1.4
2,474,656	+				-1.5
2,474,656	+				-1.2
2,474,656	+				+0.8
2,474,657	-				-1.6
2,474,657	-				+2.2
2,474,657	-				-1.7
2,474,657	-				+1.5
2,474,657	-				+2.8
2,474,657	-				+4.3
2,474,657	-				+2.3
2,474,657	-				-0.3
2,474,657	-				+1.8
2,474,657	-				-2.2
2,474,657	-				-1.7
2,474,658	+				+0.3
2,474,658	+				+1.8
2,474,658	+				+3.0
2,474,659	-				+0.2
2,474,659	-				-0.3
2,474,659	-				+3.6
2,474,704	+				-1.3
2,474,753	+				+0.1
2,474,754	-				-0.4
2,474,804	+		Psyr_2116	0.11	-1.3
2,474,804	+		Psyr_2116	0.11	+2.6
2,474,805	-		Psyr_2116	0.11	+0.4
2,474,805	-		Psyr_2116	0.11	+2.6
2,474,805	-		Psyr_2116	0.11	+3.0
2,474,893	+		Psyr_2116	0.18	-4.2
2,474,893	+		Psyr_2116	0.18	-0.9
2,474,893	+		Psyr_2116	0.18	-1.7
2,474,893	+		Psyr_2116	0.18	+3.2
2,474,894	-		Psyr_2116	0.18	-1.4
2,474,894	-		Psyr_2116	0.18	-3.0
2,475,206	-		Psyr_2116	0.41	-0.2
2,475,206	-		Psyr_2116	0.41	-1.7
2,475,284	-				+1.4
2,475,436	+		Psyr_2116	0.59	-2.3
2,475,437	-		Psyr_2116	0.59	+4.2
2,475,445	+		Psyr_2116	0.59	-3.0
2,475,446	-		Psyr_2116	0.59	-0.6
2,475,463	+		Psyr_2116	0.61	+3.3
2,475,463	+		Psyr_2116	0.61	-3.1
2,475,464	-		Psyr_2116	0.61	+3.2
2,475,464	-		Psyr_2116	0.61	+2.6
2,475,816	-		Psyr_2116	0.87	+1.8
2,476,004	+				-0.6
2,476,008	-				+0.8
2,476,016	-				-0.8
2,476,016	-				+1.1
2,476,016	-				+2.6
2,476,072	+				+2.6
2,476,114	+				+0.8
2,476,114	+				-0.4
2,476,114	+				+0.7
2,476,114	+				-1.5
2,476,114	+				+2.8
2,476,114	+				+3.2
2,476,115	-				-0.6
2,476,115	-				+2.8
2,476,115	-				+2.6
2,476,638	-		Psyr_2117	0.30	+2.4
2,476,638	-		Psyr_2117	0.30	-0.2
2,476,645	-		Psyr_2117	0.32	+3.8
2,476,645	-		Psyr_2117	0.32	+1.4
2,476,645	-		Psyr_2117	0.32	+3.0
2,476,927	+				-4.0